Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq42335 107 1e-18 seq4062 104 2e-17 seq10805 95.1 9e-15 >seq42335 Length=1439 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| |||| || |||||||| | || |||||||| | ||||||||||||| Sbjct 485 CCACCACGAAGTCGCAATACCAAATGCAATGTCGATTCCTTTTGGATATTGTAATCGGAC 426 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || || | || |||||||| || |||||||||||||| || || || || | ||| Sbjct 425 AAAGTTCGACCATCTTCCAATTGCTTTCCGGCAAAAATCAAACGTTGCTGGTCTGGCGGA 366 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | || ||||| || ||| |||||| | | | ||| || | ||| || Sbjct 365 ATTCCCTCTTTATCTTGGATTTTAGATTTGACATTTTCGATTGTATCTGATGGCTCCACT 306 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || ||||| ||||| | |||||||| ||||| ||||| Sbjct 305 TCCAAGGTGATGGTTTTACCGGTCAATGTTTTCACGAAAATCTGCAT 259 >seq4062 Length=326 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 42900 CACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTC 42959 ||||||||| | || |||||||| | || |||||||||||||| || | || || Sbjct 326 CACCAAATGCAAGGTCGATTCCTTTTGGATGTTATAATCGGACAATGTTCGACCATCTTC 267 Query 42960 CAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCT 43019 ||||||||||| ||||||||||||||||| ||||| | || | || ||||| || Sbjct 266 TAATTGTTTGCCAGCAAAAATCAATCGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTG 207 Query 43020 GATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTT 43079 ||| | |||| || | | | || || | ||| || || | || || ||||| Sbjct 206 GATTTTCGCTTTTACATTCTCGATCGTATCAGATGGCTCAACTTCCAATGTGATGGTTTT 147 Query 43080 TCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || | |||||| || ||||||||||| Sbjct 146 ACCAGTCAAAGTTTTGACGAAAATTTGCAT 117 >seq10805 Length=234 Score = 95.1 bits (104), Expect = 9e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957 || |||||||| | || || ||||| | || ||||||||||| ||||| | || Sbjct 230 AATACCAAATGCAATGTTGATTCTTTTTGAATGTTATAATCGGACAAAGTACGGCCATCT 171 Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017 ||||||||||| |||||||| ||||||||||| ||||| | || | ||||||||| || Sbjct 170 TCCAATTGTTTACCGGCAAAGATCAATCGCTGCTGATCTGGTGGAATACCTTCTTTGTCT 111 Query 43018 CTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTT 43077 ||| |||| || | ||| || || | || || || | || || ||| Sbjct 110 TGGATTTTAGCTTTTACATTTTCAATGGTATCCGATGGTTCAACTTCCAAAGTAATGGTT 51 Query 43078 TTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || || | || || ||||| |||||||| Sbjct 50 TTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 19 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381031466867442