Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq10805 122 6e-23 seq4062 122 6e-23 seq42335 104 2e-17 >seq10805 Length=234 Score = 122 bits (134), Expect = 6e-23 Identities = 159/215 (74%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || ||||| | || || |||||||| ||||| |||||| | | | | | ||| Sbjct 230 AATACCAAATGCAATGTTGATTCTTTTTGAATGTTATAATCGGACAAAGTACGGCCATCT 171 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || |||||||| || || | ||||| || || || || |||||| ||||||||||| Sbjct 170 TCCAATTGTTTACCGGCAAAGATCAATCGCTGCTGATCTGGTGGAATACCTTCTTTGTCT 111 Query 15272 CAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATT-TTCTACATCTAAGGTAATGG 15329 ||||| ||| |||||| |||| |||||||| | || ||| || || || ||||||| Sbjct 110 TGGATTTTAGCT-TTTACATTTTCAATGGTATC-CGATGGTTCAACTTCCAAAGTAATGG 53 Query 15330 TTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||| || |||| || || ||||| ||||||||| Sbjct 52 TTTTGCCAGTCAAGGTCTTGACAAAGATTTGCATA 18 >seq4062 Length=326 Score = 122 bits (134), Expect = 6e-23 Identities = 157/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCG--CGTCTT 15212 || ||||| | ||| || || ||||| ||||| |||||| | ||| ||| | |||| Sbjct 325 ACCAAATGCAAGGTCGATTCCTTTTGGATGTTATAATCGG--ACAATGTTCGACCATCTT 268 Query 15213 CTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCAC 15272 |||||||||||||||| | ||||| || || || || ||||||||| ||||| || Sbjct 267 CTAATTGTTTGCCAGCAAAAATCAATCGCTGCTGATCTGGTGGAATTCCCTCTTTATCCT 208 Query 15273 AAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 ||||| ||| |||||| | || || ||||| || || || || || |||||| Sbjct 207 GGATTTTCGCT-TTTACATTCTCGATCGTATCAGATGGCTCAACTTCCAATGTGATGGTT 149 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||||| |||| |||||| || ||||||||||| Sbjct 148 TTACCAGTCAAAGTTTTGACGAAAATTTGCAT 117 >seq42335 Length=1439 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || ||||| | || || || ||||| || ||||||||| | | ||| | ||| Sbjct 470 AATACCAAATGCAATGTCGATTCCTTTTGGATATTGTAATCGGACAAAGTTCGACCATCT 411 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || ||||| || || || | ||||||||||| ||||| |||||||| ||||| || Sbjct 410 TCCAATTGCTTTCCGGCAAAAATCAAACGTTGCTGGTCTGGCGGAATTCCCTCTTTATCT 351 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 ||||| || ||| |||| || ||||| || || || ||||| |||||| Sbjct 350 TGGATTTTAGATTTGACATTTTCGATTGTATCTGATGGCTCCACTTCCAAGGTGATGGTT 291 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||||| |||| ||||| || ||||| ||||| Sbjct 290 TTACCGGTCAATGTTTTCACGAAAATCTGCAT 259 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 15167 GTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCG--CGTCTTCTAATTGTTTGC 15224 || || || ||||||||||||||||| | ||| ||| | ||||| ||||| || | Sbjct 227 GTTGATTCCTTTTGTATGTTGTAATCAG--ACAATGTTCGGCCATCTTCCAATTGCTTTC 170 Query 15225 CAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTGCTCT 15284 | || | ||||| ||||| || || || || ||||| ||||| |||||| | Sbjct 169 CGGCAAAGATCAATCGTTGCTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTGGATT 110 Query 15285 TTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAG 15344 | ||| |||| || || || ||| || || || || || |||||||| |||| | Sbjct 109 TAACATTTTCGATAGTGTCCGACGGTTCGACTTCCAATGTTATAGTTTTACCAGTCAATG 50 Query 15345 TTTTTACAAAAATTTGCAT 15363 |||||||||| |||||||| Sbjct 49 TTTTTACAAAGATTTGCAT 31 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361858081621809