Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq33447 313 2e-80 >seq33447 Length=1513 Score = 313 bits (346), Expect = 2e-80 Identities = 634/933 (68%), Gaps = 6/933 (1%) Strand=Plus/Plus Query 12802 TTAAAAATCAATATCTAGAGA-AAATACATCATCGTCCTTATTTGACATAACAGACATTT 12860 ||||||||||| ||| | || ||||| | ||| || |||||| ||| ||| Sbjct 51 TTAAAAATCAACATCG-GTGACAAATATCTGATCTTCAGGTCGTGACATGACACCACTTT 109 Query 12861 TTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTT 12920 ||||||||||| ||| | |||||| ||||| || | ||| ||||| || || || | || Sbjct 110 TTTGATATTCGGCAACACGTTTTTCGAAAAAATTCGATTTACCTTCCAATGATATCTGTT 169 Query 12921 CCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTACACCCTAATTCTAGTAACA 12980 |||| |||||||| ||||| | ||| | ||||| ||| ||||||| | || | Sbjct 170 CCATGAAATCGAATGGATTCACTGTTTTATAATGTTTTTCACAATCTAATTCGATCAATA 229 Query 12981 ATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATT 13040 | | || ||| | | || ||||| | |||||| | | ||||| || || ||| Sbjct 230 AACGATCGGCACAATATTCAATGTAATCGGCCATTAATTTCGAATTCATACCGATCAATG 289 Query 13041 TTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGT 13100 ||| || | || || || | ||| | | ||| |||| ||| || ||||||| || | Sbjct 290 ATACGGGTAATGCATCGGTAAGAAATTCCTGTTCAATATTAACAGCATCGATAATGATTT 349 Query 13101 CTCTTATTACGTTCTC-TAATGGAGGATTTGATAGATGCTTAAACATCATACATGCAAAA 13159 | ||| | || | | |||| |||| | ||| | || | | ||| |||||| Sbjct 350 CAGCAATT-CTTTGTGATGATGGTCGATTACGAATATGATGGAATAAAAGACAGGCAAAA 408 Query 13160 TCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATA 13219 ||||| || ||||||||||| | || | || || ||||| || ||||| ||||| Sbjct 409 TCACAATGTAATCCTTCATCACGTGAAATCAATTCATTCGAAAAGGTAAGACCAGGCATT 468 Query 13220 AGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCA 13279 || || |||||||||| |||||| || || ||||| ||||| |||||||| |||||||| Sbjct 469 AGGCCACGTTTTTTAAGCCAAAAAATTGCCGCAAATGAACCGGAAAAAAAGATTCCTTCG 528 Query 13280 ACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATCCACTTT 13339 || |||||||| || || || | ||| || | ||| | | || | |||| | Sbjct 529 ACGGCTGCAAATGCAATTAAACGTTCGGCAAATGTAACCGAATCATCCTGTGTCCAACGT 588 Query 13340 CTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAAATAA 13399 | ||||| || ||||| | | ||| || | ||| || || || |||| | || Sbjct 589 ATAGCCCATTTAGCTTTCTTCTCAACACAAGGTAAATTACGGATAGCATTGAATAGAAAA 648 Query 13400 tttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGA 13459 | | ||| |||| || | ||| |||| |||||||| ||||||||| |||||| Sbjct 649 TCCTGTTCATTACGATCGGTTACATATGTATTAATCAATAATGAATACATTTCCGAATGA 708 Query 13460 ATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTC- 13518 | |||||| || || || || || ||||| ||||| | || || | || || || || Sbjct 709 ACATTTTCGATGGCAATCTGAAATCCATAGAAACAACGTGCTTCAGGTATTTGTACATCA 768 Query 13519 GGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGC 13578 || ||||| | ||| || | ||||| || || || || ||||| || ||||||||||| Sbjct 769 CGAATAAAA-CGTTCAGCCAGATTTTCATTTACGATACCATCACTGGCGGCAAAAAAAGC 827 Query 13579 AAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAACTTTAACCAATCTGGAAAATC 13638 | || ||| ||| || | |||||| ||| | ||| || ||||| | || ||| Sbjct 828 CAATACATGCGAAATGAAATGTTTTTCATTTGCATTCAATTTATTCCAATGTATAAGATC 887 Query 13639 TTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATACATCAT 13698 || ||| || || || |||||||| || || || | || || |||||||| | Sbjct 888 ACGGCTTAGATCGACTTCTTCGACGGTCCAGAATGATGCTTCGGCTTTTTTATACATTCT 947 Query 13699 CCATATATCCTTATAAACAATGGGAAACACAAC 13731 ||| ||||| | ||| || ||||||| ||| Sbjct 948 CCAAATATCATGATATTGTATTGGAAACAAAAC 980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430600278748098