Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq33447 228 2e-54 seq4062 138 3e-27 seq10805 136 9e-27 seq42335 123 6e-23 >seq33447 Length=1513 Score = 228 bits (252), Expect = 2e-54 Identities = 603/903 (67%), Gaps = 26/903 (3%) Strand=Plus/Minus Query 268703 TTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTTGCT 268762 ||||| | ||||||||||| || |||||| ||||| ||||| ||| | |||| || Sbjct 983 TTTGTTTTGTTTCCAATACAATATCATGATATTTGGAGAATGTATAAAAAAGCCGAAGCA 924 Query 268763 TCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAATTTA 268822 || || ||||| || |||||||| ||||| ||| | ||| ||||||| || || Sbjct 923 TCATTCTGGACCGTCGAAGAAGTCGATCTAAGCCGTGATCTTATACATTGGAATAAATTG 864 Query 268823 AAACCAGAAGAAAGAAGATTT-ATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGG 268881 || || | |||| || |||| || || || | | || |||||||| | |||||||| Sbjct 863 AATGCAAATGAAA-AACATTTCATTTCGCATGTATTGGCTTTTTTTGCCGCCAGTGATGG 805 Query 268882 TATCGTTAACGAAAATCTAGTAGAGAAGTTCT-GTCAAGAGGTACAGATTCCTGAAGCCA 268940 |||||| || |||||||| | || | ||| | || || ||||| || |||||||| Sbjct 804 TATCGTAAATGAAAATCTGGCTGA-ACGTTTTATTCGTGATGTACAAATACCTGAAGCAC 746 Query 268941 GATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTAT 269000 | ||||| || ||||| ||||| || || |||||| ||||||| || ||||| ||| Sbjct 745 GTTGTTTCTATGGATTTCAGATTGCCATCGAAAATGTTCATTCGGAAATGTATTCATTAT 686 Query 269001 TAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTATGAGAA 269060 | || |||| ||| || ||| || ||| || | ||||| | |||| | | Sbjct 685 TGATTAATACATATGTAACCGATCGTAATGAACAGGATTTTCTATTCAATGCTATCCGTA 626 Query 269061 CTATGGACTGTG-TGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGATAGCGCG 269119 | | |||| |||| || ||| || |||||||| | |||| | | ||| || Sbjct 625 ATTTACCTTGTGTTGAG-AAGAAAGCTAAATGGGCTATACGTTGGACACAGGATGATTCG 567 Query 269120 CCTTAC----GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGG 269175 |||| | ||| | ||| |||| ||||| || || ||||| || || ||||| || Sbjct 566 -GTTACATTTGCCGAACGTTTAATTGCATTTGCAGCCGTCGAAGGAATCTTTTTTTCCGG 508 Query 269176 GTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTC 269235 || ||||| || || |||||| | || ||| | ||||| ||||| || | || || || Sbjct 507 TTCATTTGCGGCAATTTTTTGGCTTAAAAAACGTGGCCTAATGCCTGGTCTTACCTTTTC 448 Query 269236 TAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATTTAC 269295 || |||||||| | || ||||| ||||| || || || || ||| | ||||| Sbjct 447 GAATGAATTGATTTCACGTGATGAAGGATTACATTGTGATTTTGCCTGTCTTTTATT--- 391 Query 269296 TAATTATCTTTCACACAAACCTTCTCAAGATAGAGTATACGAA---ATTATAGATTCAGC 269352 || || || | ||| || | | ||| | ||| ||||| ||| || Sbjct 390 CCATCATATTCGTAATCGACCATCATCACAAAGAATTGCTGAAATCATTATCGAT---GC 334 Query 269353 TGTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATC--TATCGATCTTATCGGTATG 269410 |||| | | ||| |||||||| || || || || | |||| || | ||||||||| Sbjct 333 TGTTAATATTGAACAGGAATTTCTTACCGATGCATTACCCGTATC-AT-TGATCGGTATG 276 Query 269411 AATAGCAAATCGATGATAGAATATATT-AAGTTCGTATCTGATAGATTGCTGGTGTCTTT 269469 ||| |||| ||| || || ||| || | || | ||| | || || | || Sbjct 275 AATTCGAAATTAATGGCCGATTACATTGAATATTGT-GCCGATCGTTTATTGATCGAATT 217 Query 269470 AGGGTTTAGTAAAAAATATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATATATCATT 269529 || | | ||| | ||||| | ||||| || ||| ||||| | |||||||| Sbjct 216 AGATTGTGAAAAACATTATAAAACAGTGAATCCATTCGATTTCATGGAACAGATATCATT 157 Query 269530 AGAAGGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAACTATCAGAAAATGGGTGTAAT 269589 |||||||| | ||||| ||||| || || || | ||||| |||| ||||| || Sbjct 156 GGAAGGTAAATCGAATTTTTTCGAAAAACGTGTTGCCGAATATCAAAAAAGTGGTGTCAT 97 Query 269590 GTC 269592 ||| Sbjct 96 GTC 94 >seq4062 Length=326 Score = 138 bits (152), Expect = 3e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 104356 ATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTG 104415 ||| || || ||||| || || || ||||| || || | |||| ||| ||||||| ||| Sbjct 320 ATGCAAGGTCGATTCCTTTTGGATGTTATAATCGGACAATGTTCGACCATCTTCTAATTG 261 Query 104416 TTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTT 104475 ||| ||||||||||| | | ||| ||||| || || ||||| ||||||||||| || || Sbjct 260 TTTGCCAGCAAAAATCAATCGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTGGATTTT 201 Query 104476 TGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535 ||||||||||| || | ||||| || || || || | ||| || || |||||||| Sbjct 200 CGCTTTTACATTCTCGATCGTATCAGATGGCTCAACTTCCAATGTGATGGTTTTACCAGT 141 Query 104536 AAGTGTTTTTACAAATATCTGCAT 104559 | ||||| || || || ||||| Sbjct 140 CAAAGTTTTGACGAAAATTTGCAT 117 >seq10805 Length=234 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 104350 TACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTC 104409 ||| | ||| ||||| |||||||| ||||| ||||| || || | ||| | || ||||| Sbjct 228 TACCAAATGCAATGTTGATTCTTTTTGAATGTTATAATCGGACAAAGTACGGCCATCTTC 169 Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469 | |||||| || ||||| || | | ||| ||||| || || || |||||||| || || Sbjct 168 CAATTGTTTACCGGCAAAGATCAATCGCTGCTGATCTGGTGGAATACCTTCTTTGTCTTG 109 Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529 || || |||||||||||||| | |||||| ||||| || || | ||||| || || Sbjct 108 GATTTTAGCTTTTACATTTTCAATGGTATCCGATGGTTCAACTTCCAAAGTAATGGTTTT 49 Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | || || ||||| || ||||| Sbjct 48 GCCAGTCAAGGTCTTGACAAAGATTTGCAT 19 >seq42335 Length=1439 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || || || ||||| || || || || || ||||| | |||| || ||||| | ||| Sbjct 233 TGCAAAGTTGATTCCTTTTGTATGTTGTAATCAGACAATGTTCGGCCATCTTCCAATTGC 174 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 ||||| ||||| || | | || ||||| ||||| || ||||| || ||||| || || Sbjct 173 TTTCCGGCAAAGATCAATCGTTGCTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTG 114 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | ||| |||||||| | || || ||||| || || | ||| ||||| |||||||| Sbjct 113 GATTTAACATTTTCGATAGTGTCCGACGGTTCGACTTCCAATGTTATAGTTTTACCAGTC 54 Query 104537 AGTGTTTTTACAAATATCTGCAT 104559 | |||||||||||| || ||||| Sbjct 53 AATGTTTTTACAAAGATTTGCAT 31 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150325185509292