Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_005857.1 Length=51601 Score E Sequences producing significant alignments: (Bits) Value seq8893 320 6e-83 >seq8893 Length=7363 Score = 320 bits (354), Expect = 6e-83 Identities = 765/1145 (67%), Gaps = 20/1145 (2%) Strand=Plus/Minus Query 27458 TTCATTATTACTCCTCCCAACGTGGCTTAATCAAATCATCAAAAATTTCCTGGCAAACAG 27517 ||||||| | ||||||||| | || || || || | | || || ||||| | Sbjct 2079 TTCATTACGCATTCTCCCAACGCGTTTTGATTAATCGATTATAGATCTCAGCACAAACCG 2020 Query 27518 GCTCCCAAATAGAAACTGCATTTCGCCAGGCGTTAAGTGTTGAGCGCTGATAAGCAGCCT 27577 | |||||||| | || || || |||||||| | || || ||||||| || || | Sbjct 2019 GTTCCCAAATGGCCACCGCGTTACGCCAGGCAGCCGGCGTAGAACGCTGATTCGCCGCTT 1960 Query 27578 GCTCAAATACCGTACGCATTTTTATTTGGCCCTTTCCTACTTCATCTGTCACCCTGACAA 27637 |||| || || |||||||| | | ||||| ||||| |||||||||||||| | || | Sbjct 1959 GCTCGAAAACGGTACGCATCCTCACCTGGCCTTTTCCGACTTCATCTGTCACACGCACCA 1900 Query 27638 CTTGACGCAGAACCATCGACCCCCACGTATTTCTTATCTGCTCTTCCATCCAGCGCGACT 27697 ||| |||||||||| ||||| | || | || || || |||||||| | || | Sbjct 1899 CTTCCTTCAGAACCATCCCGCCCCAGGCGTTACGGATTTGATCATCCATCCATTGAGATT 1840 Query 27698 GATTACCAGTAGTCAGGCTGTATTTGGTTAGCAGCAGTCGTACCACCGGCTCGAAACCGC 27757 | |||| | |||| |||| || | || | || || | || || |||||| Sbjct 1839 GGCTACCGACTGCATTGCTGAATTTCGTGATAAGGACGCGAACATCGGGTTCAAAACCGT 1780 Query 27758 CTAAATCAACGGTTTTTAG---TAGGTCCAGAAGCATGGTGAAGAACTGCAGAACGGATG 27814 || |||| | || || || || | | |||||| || |||||||| || Sbjct 1779 TCAAGTCAA---TATTGAGCATCAGATCGCGCAACATGGTAAAAAACTGCAGGGTAGAGA 1723 Query 27815 AATAATCAAATAGCTCTGCAGGGGTAGCTACGACAATAATATCGGCAGCACAAACAACAT 27874 ||| ||| | ||||| || || |||| |||||||| | ||| || ||||| | |||| Sbjct 1722 CATAGTCATAAAGCTCCGCCGGCGTAGGAACGACAATGACATCTGCGGCACAGGCGACAT 1663 Query 27875 TAATCGTCCCTGTTCCGAGGTTAGGAGCGCTATCAATAACGATAATGTCATAGTTATCCC 27934 |||| |||||| | || || || ||||| || || | ||||| | |||||| | |||| Sbjct 1662 TAATTGTCCCTATCCCAAGATTGGGAGCACTGTCCAGCACGATCACATCATAGCTGTCCC 1603 Query 27935 ATACGGATTCTATAGCAGCCCGTAGCATCAGGTGAGGCGGATGAGGTAGTTTTCCTTGGG 27994 | || ||||| || || ||||| || | ||||| |||| ||| ||||| || || Sbjct 1602 AAACAGATTCAATGGCGGCCCGAAGAAGAAGGTGTGGCGCCACAGGGAGTTTCCC---GG 1546 Query 27995 CGT--GGTATTGCAT-CAGGTCCGTTTCGATACGGTGAAGCGCCAAGCAGCTGGGGATAA 28051 | | | | | || | || | ||| |||||||| | ||||||||| || || | Sbjct 1545 CATCATGCAACGGATAAATTTCGGATTCTATACGGTGTACAGCCAAGCAGGATGGAATGA 1486 Query 28052 TGTCCAGACCTGGCCAGCAGGTCGGCTTTATAGCGTATTCCGCATTATCACGCTCACCAA 28111 |||||||| |||||||| || || || || || || | |||| ||||||| ||| | Sbjct 1485 TGTCCAGATTGGGCCAGCACGTGGGTTTGATGGCATAAGCGGCATCGTCACGCTGACCCA 1426 Query 28112 GGTAAAACGGGAGCAAAGTATCATCGGCGTGAATGTGCAAATCAGGCACATAGCCATGAT 28171 ||| | ||||| | ||||| || | ||||| |||||||| || ||||||||||||| Sbjct 1425 TATAATAAGGGAGAAGGGTATCTTCCGGATGAATATGCAAATCCGGAACATAGCCATGAT 1366 Query 28172 ACATAGAGGCGGTTCCCTGCGGATCATTACCTTCAATGAGTAGAACTCGGTGACCC-TGT 28230 | | || |||||| |||| ||||| | | ||||| | || || | || |||| ||| Sbjct 1365 AAAGCGACGCGGTTGCCTGAGGATCTGTGGCGTCAATTAATAAGACAC-GTAACCCTTGT 1307 Query 28231 AAGGCTAACCATTGAGCTTCATGTACTGCAGATGAGGTTTTATAAACGCCACCTTTGTGT 28290 || || | ||||||||| |||||| | | || ||||||||| | || ||||| || Sbjct 1306 AATGCCATCCATTGAGCAATATGTACCGATGTGGATGTTTTATAAGCCCCCCCTTTATGA 1247 Query 28291 GACATAACAGCTAAAACGGCTGGATTTTTATCGGCTGGCCGTTGATTAG-GATTACCGAA 28349 | || || | || | |||| | |||| |||| ||| | | || |||| || Sbjct 1246 GCAGCTACCGCAAGGACAACAGGATCCTGTCCGGCCGGCC-TTGTTGGGCGAGTACCAAA 1188 Query 28350 AATGTTCCGCATATGGCTAATTTGGTCGATGGTATAGCCAGCACGACGTTCGACGCGGCC 28409 | | | ||| | ||||| | || | || || | || | || || || || Sbjct 1187 CACATCTCTCATTGCATTGATTTGCTGTATTGAGTATCCGGTGCGTTGCTCAACCCGTCC 1128 Query 28410 ACGCAATTCAAAATCAGGTGGCGGTAACCGCCC--ATTCTTCTCAGCATCTCTAATCGCT 28467 | || | || || || | || ||| || | ||||| || | || |||| | Sbjct 1127 AATCATTGCAGTTTCCGGGGATGGCAACTTTCCTGACTCTTCATAG--TTTCGGATCGTT 1070 Query 28468 TGCGGTGAAACACCGATTAAATCAGCAACCTCGGTTATCCCCCAGCGACGAGTAATCTTA 28527 |||| | ||||| | | ||| | | |||| || |||| ||| || || ||||| Sbjct 1069 TGCGCCGTGACACCCACAAGATCTGAAGCCTCAGTGATCCGCCAACGCCGGGTAATTGCT 1010 Query 28528 CGTGCTTCAGGGCTATCATCACCAAATTGCGCTATGGCAATGGCTTGCGTCATCTCTTGT 28587 || ||||| ||||| || | ||||||||||||| | || || | |||||||| ||| Sbjct 1009 CGAGCTTCCGGGCTGTCGTTACCAAATTGCGCTTTAGCGATTTCCTGCGTCATAAATTGA 950 Query 28588 CCGCG 28592 ||||| Sbjct 949 CCGCG 945 Score = 131 bits (144), Expect = 6e-26 Identities = 189/267 (71%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 26965 CCCACGCTCATATGCACTGGTTGGCCGATAGTCGTTGCCCACTTGCGATAACCACTGCAT 27024 |||||||||||||||||||||||||||||| || || || | ||| |||| ||| |||| Sbjct 2578 CCCACGCTCATATGCACTGGTTGGCCGATAATCATTTCCGATTTGAGATAGCCAACGCAT 2519 Query 27025 CTGTTCATCGTCGAGATCACCGACTAATACGCGGTAGTCACAGCCAGTAATTATGGCGGT 27084 |||| |||||| | |||||||| | || ||| |||| |||||| | ||||||| Sbjct 2518 CTGTGCATCGTTCAATTCACCGACGAGAACTTTGTACTCACTGCCAGTCAGAATGGCGGC 2459 Query 27085 TTTACGGCGTCGGGAACCATCAGCGACCTCTATAATACCTGACGTTCTACGAGCGAAGGC 27144 ||||||||||| ||||| || | || | || || | ||||| | || || Sbjct 2458 CTTACGGCGTCGACTGCCATCCGCAATTTCGACAAGGCCATTCTGACTACGTCCAAAAGC 2399 Query 27145 GGGGTTCTGCTGACCAGAAGTAAGGAATGAAGGAACGAGGTCGGCCAATGCAGCTTCGTC 27204 |||| ||| ||||| || || || || || || | | || | | | | |||| Sbjct 2398 GGGGGACTGTTGACCTGACGTTAGAAACGAGGGCAACAAATCATCAAGGGAGGATTCGGT 2339 Query 27205 TAATAGCTCTTGATCGCGTTCGTTGCC 27231 ||||| |||||| ||||||||||| Sbjct 2338 CAATAGGTCTTGAAGACGTTCGTTGCC 2312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164859056045894