Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq14022 163 3e-35 seq52293 131 2e-25 >seq14022 Length=1756 Score = 163 bits (180), Expect = 3e-35 Identities = 296/429 (69%), Gaps = 12/429 (3%) Strand=Plus/Minus Query 7053 TATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAA 7112 |||| | ||||||||||| || | || | || || | ||||| ||||| ||||| | Sbjct 1361 TATACCTGATGGATTCCATGCCGATATAATCATTCGACGATCATCCGGATTCGTTTTGAT 1302 Query 7113 TTT-TGTTATAATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAAT 7171 | ||| || || ||| ||||||||| | ||| || || | ||||| |||| | || Sbjct 1301 CGTATGTATTAGTTGTTT-TAATTGATCAACACCTTGTCCATTATAATCGGTATAATTAT 1243 Query 7172 TTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTT 7231 | ||| | || |||||||||||||||||||| ||||| | ||||||| ||| |||| Sbjct 1242 CTCGATATTCGGCACCAAAATGTCTCCATTGAAAACCATATACCGGACCTAGATCTCCTT 1183 Query 7232 CTTCACGATGATTAAATCCTAATCGAT--TTAAATTAGATTTTGATCCATAAGCATCCCA 7289 ||| ||||| ||||||| | | || ||||| | | ||||||| |||||||| Sbjct 1182 CTTGACGATCGGTAAATCCAAGACTATCAAGAAATT--CTCTCGATCCATTTGCATCCCA 1125 Query 7290 AATATGTACAGAtttttttGATAAATTTAAAGAATTTGTAGATCCTTTAAGGAACCATAA 7349 || | ||| ||||| ||||| ||| |||| || || |||| | |||||||| Sbjct 1124 GATTTTTACGCCTTTTTCGGATAATTTTTTCGAATCAGTTGAACCTTGTATAAACCATAA 1065 Query 7350 AAGTTCTTCTACTATTCCACGCCAAAACATTCTTTTTGTAGTGAATAAAGGGAATGT--- 7406 || ||||| || | |||||||||| | | ||| || || | || || | ||| Sbjct 1064 TAGCTCTTCAACAACAGCACGCCAAAATACACGTTTCGTTGTAATCAATGGCATTGTTTG 1005 Query 7407 ---ACTTAAATCATATCTATTCTGTAAACCAAATACTGAAAGAGTACCTGTTCCAGTTCT 7463 || | ||| | | | ||| ||| |||||||||| ||||| ||||| |||| Sbjct 1004 ATCACGAATTGAATAACGACTTTGTGTACCGAATACTGAAAATGTACCGGTTCCTGTTCG 945 Query 7464 ATCAATTTT 7472 ||| |||| Sbjct 944 GTCATTTTT 936 >seq52293 Length=1822 Score = 131 bits (144), Expect = 2e-25 Identities = 470/728 (65%), Gaps = 24/728 (3%) Strand=Plus/Plus Query 164392 AATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTC 164451 |||||| |||| ||| |||||| | ||||| || || ||||| | || ||| Sbjct 49 AATTGGGATTTCGAATCAATGGGCATTGGTGGTCTGGACAAGGAATTCAATGCCATATTC 108 Query 164452 AGACGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAA 164511 | || |||||||| ||| | | ||||| |||||||| || || | || ||| Sbjct 109 CGTCGGGCATTTGCATCTCGTGTATTTCCTCCTGAAATAATCGAAGAACTCGGTATCAAA 168 Query 164512 CATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGA 164571 ||| | || ||| | || |||| || |||||| || |||||||| |||||| || Sbjct 169 CATGTTCGTGGTATTCTCTTGTATGGGCCACCTGGTACGGGCAAAACATTGATGGCTAGA 228 Query 164572 TGCATTGCTCAAGCTTTTAAA--TCGCGACCCGTTAAAATTGTTAATGGTCCTGAATTAT 164629 |||| || || || ||| || || ||||| || ||||| ||| || ||| Sbjct 229 CAGATTGGAAAAATGTTGAACGCTCGTGAACCA--AAAATCGTCAATGGACCTCAAATAT 286 Query 164630 TGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAG 164689 | |||| ||||| || || || ||||| || || | || || || | || ||||||| Sbjct 287 TAGACAAGTATGTGGGCGAATCCGAAGCAAACATTCGTAAATTATTCGAAGATGCTGAAG 346 Query 164690 AAGAACAAAAGAAAGCAGGTTTAGC--TAGTAAATTACATGTTATTGTTTTTGATGAGAT 164747 | ||||| | | | | | || | ||| || || |||| |||| |||||||| Sbjct 347 AGGAACAG--GCACGTATGGGTATCAATAGCGGTTTGCACATTATCATTTTCGATGAGAT 404 Query 164748 AGATGCTCTTTGCAAAAAACGTGGT--GATA------ATATTA----TTCATGATGCAGT 164795 ||||| | || || || || ||| | || ||||||| | || Sbjct 405 CGATGCCATCTGTAAGGCTCGAGGATCGATGGCCGGCACATCGGCAGTTCATGACACGGT 464 Query 164796 GGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGT 164855 || ||||||||| | | ||||| ||||| | || || || || || || ||| | | Sbjct 465 CGTCAATCAGTTGTTGGCCAAAATCGATGGAATTGATTCATTGAACAACATATTAGTCAT 524 Query 164856 AGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGA 164915 |||||||| |||||| || | ||||| || || || | |||||||||||| | || Sbjct 525 TGGTATGACTAACCGAAAAGACATGATTGACGAAGCATTGCTTCGACCTGGTCGACTCGA 584 Query 164916 ATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTTCA 164975 | | | || ||||| | | ||| | |||| || || |||| || || || |||| Sbjct 585 AGTACAGATGGAAATCAGTCTTCCCAATGAAGATGGCCGTATTCAGATATTGAACATTCA 644 Query 164976 TGTGGCTAAAATGAAATCCTGT--GATATATTATCTCCCGATGTAGATTTAAATAAAATA 165033 | | ||||||| || || | | | | | |||||||| || | || | Sbjct 645 TACTGGTAAAATG--CGCCAGTACAAAAAAATTGCACCCGATGTCGACATTCGAGAATTG 702 Query 165034 GCTGCCGAAACTAAAAATTATAGTGGTGCTGAATTAGAGGGATTAGTAAGAGCCGCTCAA 165093 || || |||||||||| | ||||| ||| | || || |||| || || |||||| Sbjct 703 GCGGCGTTGACTAAAAATTTTTCCGGTGCAGAAATTGAAGGGCTAGTTAGGGCAGCTCAA 762 Query 165094 TCAACCGC 165101 || || || Sbjct 763 TCGACTGC 770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595330136348400