Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12]
72,749 sequences; 43,437,841 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq42335 150 2e-31
seq10805 131 2e-25
seq4062 120 3e-22
>seq42335
Length=1439
Score = 150 bits (166), Expect = 2e-31
Identities = 164/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851
|||||| |||||||||||||| ||||||||||| | ||| ||||| || || |
Sbjct 246 TCGCAATACCAAGTGCAAAGTTGATTCCTTTTGTATGTTGTAATCAGACAATGTTCGGCC 187
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
||| |||| || |||||| ||||||| |||| ||||||||||||||| |||||||| ||
Sbjct 186 ATCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGAGGGATACCTTCCTT 127
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
||| | ||||| | || || ||| |||||| | | ||||| || | || ||
Sbjct 126 GTCCTGGATTTTGGATTTAACATTTTCGATAGTGTCCGACGGTTCGACTTCCAATGTTAT 67
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
||||| ||||| | ||||| |||||||| |||||||
Sbjct 66 AGTTTTACCAGTCAATGTTTTTACAAAGATTTGCATGC 29
Score = 116 bits (128), Expect = 3e-21
Identities = 159/220 (72%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851
|||||| ||||| ||||| || ||||||||||| | || |||||| || ||| | ||
Sbjct 474 TCGCAATACCAAATGCAATGTCGATTCCTTTTGGATATTGTAATCGGACAAAGT--TCGA 417
Query 94852 --ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCT 94909
||| |||| || |||||| |||| || || | |||||| ||||| ||||| || |||
Sbjct 416 CCATCTTCCAATTGCTTTCCGGCAAAAATCAAACGTTGCTGGTCTGGCGGAATTCCCTCT 357
Query 94910 TTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTG 94969
|| || | ||||| | ||||| ||| || || | | || || || | |||
Sbjct 356 TTATCTTGGATTTTAGATTTGACATTTTCGATTGTATCTGATGGCTCCACTTCCAAGGTG 297
Query 94970 ATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|||||||| || || | |||||||| || ||||||||||
Sbjct 296 ATGGTTTTACCGGTCAATGTTTTCACGAAAATCTGCATGC 257
>seq10805
Length=234
Score = 131 bits (144), Expect = 2e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
||||| ||||| ||||| || ||||| ||||| | |||||||||| || ||| | |
Sbjct 233 CGCAATACCAAATGCAATGTTGATTCTTTTTGAATGTTATAATCGGACAAAGTACGGCCA 174
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| |||| ||||| ||| ||||||| |||| ||||||||||| |||||||||||||||
Sbjct 173 TCTTCCAATTGTTTACCGGCAAAGATCAATCGCTGCTGATCTGGTGGAATACCTTCTTTG 114
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | ||||| || || || | | || || | | || || || | || |||
Sbjct 113 TCTTGGATTTTAGCTTTTACATTTTCAATGGTATCCGATGGTTCAACTTCCAAAGTAATG 54
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| ||||| | || || |||||||| |||||
Sbjct 53 GTTTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 19
>seq4062
Length=326
Score = 120 bits (132), Expect = 3e-22
Identities = 156/214 (73%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855
|||||| ||||| || ||||||||||| | |||||||||| || |||| || |||
Sbjct 326 CACCAAATGCAAGGTCGATTCCTTTTGGATGTTATAATCGGACAA--TGTTCGACCATCT 269
Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915
|| | ||||| || |||| || |||| ||||||||||| ||||| || ||||| ||
Sbjct 268 TCTAATTGTTTGCCAGCAAAAATCAATCGCTGCTGATCTGGTGGAATTCCCTCTTTATCC 209
Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975
| ||||| || || || ||| || |||| | || || || | |||||||||
Sbjct 208 TGGATTTTCGCTTTTACATTCTCGATCGTATCAGATGGCTCAACTTCCAATGTGATGGTT 149
Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| ||||| | |||||| || || || |||||||
Sbjct 148 TTACCAGTCAAAGTTTTGACGAAAATTTGCATGC 115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447883540793640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |