Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq4386 136 3e-27 seq42335 132 3e-26 seq10805 111 1e-19 seq4062 105 4e-18 seq68963 86.0 4e-12 >seq4386 Length=4112 Score = 136 bits (150), Expect = 3e-27 Identities = 87/95 (92%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct 3286 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGGTAGGGACAGTGGGAATCTCGT 3227 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 3226 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3192 Score = 105 bits (116), Expect = 4e-18 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| Sbjct 1012 CTCTCTCTTCAAAGTGCTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGGTCTCGC 953 Query 20007 GGTAATATTTAGCCTT 20022 || ||||||| ||| Sbjct 952 TGTTGTATTTAGTCTT 937 >seq42335 Length=1439 Score = 132 bits (146), Expect = 3e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38103 CGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCG 38162 ||||| ||||| || | ||| |||||||| || |||||||||||||| || | Sbjct 245 CGCAATACCAAGTGCAAAGTTGATTCCTTTTGTATGTTGTAATCAGACAATGTTCGGCCA 186 Query 38163 TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTG 38222 || || ||||| ||||||||||| || | ||||| ||||| | |||| ||||| ||| Sbjct 185 TCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGAGGGATACCTTCCTTG 126 Query 38223 TCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACT-TTCAACTTCTAATGTAAT 38281 ||| ||||| || ||||| | || ||| || | || ||| ||||| ||||| || Sbjct 125 TCCTGGATTTTGGATTTAACATTTTCGATAGTGTC-CGACGGTTCGACTTCCAATGTTAT 67 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 ||||||||| ||||| ||||| || || || |||||| Sbjct 66 AGTTTTACCAGTCAATGTTTTTACAAAGATTTGCATG 30 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38103 CGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCG 38162 ||||| |||||||| | || |||||||| ||||||||||| |||||| || | Sbjct 473 CGCAATACCAAATGCAATGTCGATTCCTTTTGGATATTGTAATCGGACAAAGTTCGACCA 414 Query 38163 TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTG 38222 || || ||||| ||||||||||| || | ||||| || || | || | || ||||| Sbjct 413 TCTTCCAATTGCTTTCCGGCAAAAATCAAACGTTGCTGGTCTGGCGGAATTCCCTCTTTA 354 Query 38223 TCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATA 38282 || ||||| || ||||| | || |||||| || ||||| || || || Sbjct 353 TCTTGGATTTTAGATTTGACATTTTCGATTGTATCTGATGGCTCCACTTCCAAGGTGATG 294 Query 38283 GTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 |||||||| ||||| ||||||||||| ||||||||| Sbjct 293 GTTTTACCGGTCAATGTTTTCACGAAAATCTGCATG 258 >seq10805 Length=234 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38102 ACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC 38161 |||||| |||||||| | || || |||||||| || ||||| |||||| ||| | Sbjct 234 ACGCAATACCAAATGCAATGTTGATTCTTTTTGAATGTTATAATCGGACAAAGTACGGCC 175 Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221 || || |||||||| |||||||| || | || || ||||| | || | |||||||| Sbjct 174 ATCTTCCAATTGTTTACCGGCAAAGATCAATCGCTGCTGATCTGGTGGAATACCTTCTTT 115 Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281 ||| ||||| || ||||| | | ||||| ||||||||| || ||||| Sbjct 114 GTCTTGGATTTTAGCTTTTACATTTTCAATGGTATCCGATGGTTCAACTTCCAAAGTAAT 55 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| || |||||||| || || || || ||||| Sbjct 54 GGTTTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 19 >seq4062 Length=326 Score = 105 bits (116), Expect = 4e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 38108 CACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTC 38167 ||||||||| | || |||||||| || || ||||| ||||| || | || || Sbjct 326 CACCAAATGCAAGGTCGATTCCTTTTGGATGTTATAATCGGACAATGTTCGACCATCTTC 267 Query 38168 TAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCAT 38227 ||||||||| || ||||| || | || || ||||| | || | || ||||| ||| Sbjct 266 TAATTGTTTGCCAGCAAAAATCAATCGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTG 207 Query 38228 AATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTT 38287 ||||| || ||||||| || ||||| |||||||| ||||| || ||||| Sbjct 206 GATTTTCGCTTTTACATTCTCGATCGTATCAGATGGCTCAACTTCCAATGTGATGGTTTT 147 Query 38288 ACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 ||| ||||| ||||| ||||| || |||||| Sbjct 146 ACCAGTCAAAGTTTTGACGAAAATTTGCATG 116 >seq68963 Length=607 Score = 86.0 bits (94), Expect = 4e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||| ||| |||| |||||||||||||| |||| |||||||||||||||||||||| Sbjct 461 CTCTCCTTTCGAAGTGCTTTTCAACTTTCCTTCACAGTACTTGTTCGCTATCGGTCTCTT 402 Query 20007 GGTAATATTTAG 20018 ||| ||||||| Sbjct 401 AGTAGTATTTAG 390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334650226287419