Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq4062 156 4e-33 seq42335 140 3e-28 seq10805 136 3e-27 >seq4062 Length=326 Score = 156 bits (172), Expect = 4e-33 Identities = 164/213 (77%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || |||||||| |||||| |||||||| | ||||| ||| | ||| Sbjct 117 ATGCAAATTTTCGTCAAAACTTTGACTGGTAAAACCATCACATTGGAAGTTGAGCCATCT 176 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || |||||| | || |||| |||| || || ||||| || |||||||| || Sbjct 177 GATACGATCGAG--AATGTAAAAGCGAAAATCCAG-GATAAAGAGGGAATTCCACCAGAT 233 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | |||||||| ||||||||||||||||||| ||| || || |||||| Sbjct 234 CAGCAGCGATTGATTTTTGCTGGCAAACAATTAGAAGATGGTCGAACATTGTCCGATTAT 293 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTG 25208 || || ||||| ||||| || | ||||| ||| Sbjct 294 AACATCCAAAAGGAATCGACCTTGCATTTGGTG 326 >seq42335 Length=1439 Score = 140 bits (154), Expect = 3e-28 Identities = 160/213 (75%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || |||||||||||| ||||||| | ||||||||| | || Sbjct 259 ATGCAGATTTTCGTGAAAACATTGACCGGTAAAACCATCACCTTGGAAGTGGAGCCATCA 318 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || ||||| |||| || | |||| || || ||||| || ||||| || || Sbjct 319 GATACAATCGAAAATGTCA---AATCTAAAATCCAA-GATAAAGAGGGAATTCCGCCAGA 374 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| || || | ||||||||||| || ||||| ||||||| ||| ||| || |||||| Sbjct 375 CCAGCAACGTTTGATTTTTGCCGGAAAGCAATTGGAAGATGGTCGAACTTTGTCCGATTA 434 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGT 25207 |||||| ||||| ||||| || | ||||| || Sbjct 435 CAATATCCAAAAGGAATCGACATTGCATTTGGT 467 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| |||||||| || ||||| |||||| | || ||| | ||||| || |||| Sbjct 31 ATGCAAATCTTTGTAAAAACATTGACTGGTAAAACTATAACATTGGAAGTCGAACCGTCG 90 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | || |||||| ||||| ||||| || || || || || Sbjct 91 GACACTATCGAAAATGTTAAATCCAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAG 150 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | || |||||||| || ||||| ||||||| || || || |||||||| Sbjct 151 CAACGATTGATCTTTGCCGGAAAGCAATTGGAAGATGGCCGAACATTGTCTGATTACAAC 210 Query 25179 ATTCAAAAAGAATCCAC 25195 || ||||| ||||| || Sbjct 211 ATACAAAAGGAATCAAC 227 >seq10805 Length=234 Score = 136 bits (150), Expect = 3e-27 Identities = 159/212 (75%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| ||||| || ||| |||| || | ||||| || | || Sbjct 19 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAAACCATTACTTTGGAAGTTGAACCATCG 78 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || | || |||| |||| || ||||||||||| |||||||| || Sbjct 79 GATACCATTGAA--AATGTAAAAGCTAAAATCCAA-GACAAAGAAGGTATTCCACCAGAT 135 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | || |||||||| |||||||| ||||||| || ||| || |||||| Sbjct 136 CAGCAGCGATTGATCTTTGCCGGTAAACAATTGGAAGATGGCCGTACTTTGTCCGATTAT 195 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGT 25207 || |||||||||||||| || | ||||| || Sbjct 196 AACATTCAAAAAGAATCAACATTGCATTTGGT 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432943799072435