Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq10805 123 2e-23 seq42335 113 4e-20 seq4062 95.1 1e-14 >seq10805 Length=234 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||| |||||||| || |||| |||||||||||||| ||||| ||||| Sbjct 19 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAAACCATTACTTTGGAAGTTGAACCATCG 78 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | ||| | |||||| ||||| ||||||||||| |||| ||||| Sbjct 79 GATACCATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGTATTCCACCAGATCAG 138 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || | | || | ||| || ||||||||||||||| ||| || |||||||||| Sbjct 139 CAGCGATTGATCTTTGCCGGTAAACAATTGGAAGATGGCCGTACTTTGTCCGATTATAAC 198 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGT 111402 || ||||||||||| ||| | ||||| || |||||| Sbjct 199 ATTCAAAAAGAATCAACATTGCATTTGGTATTGCGT 234 >seq42335 Length=1439 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| ||||| || ||||| ||||||| |||||||| ||| ||||| ||| || Sbjct 259 ATGCAGATTTTCGTGAAAACATTGACCGGTAAAACCATCACCTTGGAAGTGGAGCCATCA 318 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | | | | || ||| ||||| || ||||| || |||| || || Sbjct 319 GATACAATCGAAAATGTCAAATCTAAAATCCAAGATAAAGAGGGAATTCCGCCAGACCAG 378 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | | |||| ||| || || |||||||||||| | |||| || ||||||| ||| Sbjct 379 CAACGTTTGATTTTTGCCGGAAAGCAATTGGAAGATGGTCGAACTTTGTCCGATTACAAT 438 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAA 111416 || ||||| ||||| ||| | ||||| || ||||| || || ||||| || Sbjct 439 ATCCAAAAGGAATCGACATTGCATTTGGTATTGCGACTTCGTGGTGGAAA 488 >seq4062 Length=326 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||||||||| |||||||| |||| || |||||||| || ||||| || || Sbjct 117 ATGCAAATTTTCGTCAAAACTTTGACTGGTAAAACCATCACATTGGAAGTTGAGCCATCT 176 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | | | | |||||| ||||| || ||||| || |||| ||||| Sbjct 177 GATACGATCGAGAATGTAAAAGCGAAAATCCAGGATAAAGAGGGAATTCCACCAGATCAG 236 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || | | |||| ||| ||||||||||| |||||| | ||| || |||||||||| Sbjct 237 CAGCGATTGATTTTTGCTGGCAAACAATTAGAAGATGGTCGAACATTGTCCGATTATAAC 296 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTG 111396 || ||||| ||||| || | ||||| ||| Sbjct 297 ATCCAAAAGGAATCGACCTTGCATTTGGTG 326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422664920705800