Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq10805 149 5e-31 seq42335 140 3e-28 seq4062 134 1e-26 seq23110 95.1 1e-14 seq22487 91.5 1e-13 seq66633 87.8 2e-12 >seq10805 Length=234 Score = 149 bits (164), Expect = 5e-31 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || || || || ||||| | ||| | ||||| ||| | | Sbjct 19 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAAACCATTACTTTGGAAGTTGAACCATCG 78 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || | ||| ||||| |||||||| || ||||||||||| ||||| Sbjct 79 GATACCATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGTATTCCACCAGATCAG 138 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || |||||||| ||||| || || ||| ||| || | |||||||| ||| Sbjct 139 CAGCGATTGATCTTTGCCGGTAAACAATTGGAAGATGGCCGTACTTTGTCCGATTATAAC 198 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 |||||||||||||| || | ||||| || ||||| Sbjct 199 ATTCAAAAAGAATCAACATTGCATTTGGTATTGCG 233 >seq42335 Length=1439 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || ||||| || ||||||||||| |||| | |||||||| | | Sbjct 259 ATGCAGATTTTCGTGAAAACATTGACCGGTAAAACCATCACCTTGGAAGTGGAGCCATCA 318 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || ||||| ||||| ||||| || ||||| ||||| || || || Sbjct 319 GATACAATCGAAAATGTCAAATCTAAAATCCAAGATAAAGAGGGAATTCCGCCAGACCAG 378 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || |||||||| || || || || ||| || || | ||||||||||| Sbjct 379 CAACGTTTGATTTTTGCCGGAAAGCAATTGGAAGATGGTCGAACTTTGTCCGATTACAAT 438 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||| ||||| || | ||||| || |||||| | || || || Sbjct 439 ATCCAAAAGGAATCGACATTGCATTTGGTATTGCGACTTCGTGGTGG 485 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| ||||| || || |||||||| | || | ||||| ||| | | Sbjct 31 ATGCAAATCTTTGTAAAAACATTGACTGGTAAAACTATAACATTGGAAGTCGAACCGTCG 90 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| ||||| || |||||||| ||||| || || ||||| Sbjct 91 GACACTATCGAAAATGTTAAATCCAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAG 150 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || |||||||| || || || || ||| ||| || | || ||||||||| Sbjct 151 CAACGATTGATCTTTGCCGGAAAGCAATTGGAAGATGGCCGAACATTGTCTGATTACAAC 210 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||| ||||| || | || || || |||||| | || || || Sbjct 211 ATACAAAAGGAATCAACTTTGCACTTGGTATTGCGACTTCGTGGCGG 257 >seq4062 Length=326 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || |||||||| || |||||||| |||| | ||||| || | | Sbjct 117 ATGCAAATTTTCGTCAAAACTTTGACTGGTAAAACCATCACATTGGAAGTTGAGCCATCT 176 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||| || || || ||||| |||||||| ||||| Sbjct 177 GATACGATCGAGAATGTAAAAGCGAAAATCCAGGATAAAGAGGGAATTCCACCAGATCAG 236 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || ||||| |||||||| ||||| ||| || || | |||||||| ||| Sbjct 237 CAGCGATTGATTTTTGCTGGCAAACAATTAGAAGATGGTCGAACATTGTCCGATTATAAC 296 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 || ||||| ||||| ||| | ||||| || Sbjct 297 ATCCAAAAGGAATCGACCTTGCATTTGGT 325 >seq23110 Length=276 Score = 95.1 bits (104), Expect = 1e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 22321 GGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGC 22380 ||||| ||||| ||||| |||||| | || ||||| || |||||||| || ||| |||| Sbjct 98 GGTATCCCACCAGATCAGCAACGTTTGATTTTTGCTGGTAAACAGTTGGAAGATGGCCGC 39 Query 22381 ACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | || ||||||||||| ||||||||||| || Sbjct 38 ACCTTGTCGGATTACAACATCCAAAAAGAATCTAC 4 >seq22487 Length=722 Score = 91.5 bits (100), Expect = 1e-13 Identities = 278/424 (66%), Gaps = 12/424 (3%) Strand=Plus/Minus Query 129131 TTACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAA 129190 |||| ||||| || |||| | ||| || | | |||||| || |||| | || |||| Sbjct 454 TTACCTGAAATTCTCCCGAAAGAACACGTCTAGTGTAAATATTAGTGGTATAGGGTTCAA 395 Query 129191 ACGATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCAC--GCA 129248 | ||||||||||| || | || || || || | || |||||||| ||| || ||| Sbjct 394 AGGATTCATTGTTACCAAGAATCTGGGCAGTCGAAGCTGTGGGCATTGGAGCTACAAGCA 335 Query 129249 AAGCGAGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACAT 129308 | || | ||||| | ||| |||| | || ||| || | |||| | ||| | Sbjct 334 A-GCTA-TTTCGAATACCATGCTTTGCGATTCGAGATTTCAAATCATTCCAATTCCAAAG 277 Query 129309 CGATGTGGGTGTGTGATTCCACAAGTCGTATTGCAATATACCC----AAACTGGCGGGAC 129364 | ||| ||| ||||||||| ||| | || | ||||| | ||||| | | Sbjct 276 TGTTGTTGGTTGCCGATTCCACATGTCAAACTGTAGAATACCTTTGGACACTGGTGATCC 217 Query 129365 TGGAAAAGTAGGAATCGTGCACGCCGTAAGCTTTTGCCAATTCGCAACTCGCTTCCAATG 129424 | | | || | || || | || || |||||||| ||||| ||||| || | Sbjct 216 TTCATATGTTTCATA--TGGAC--CATATTGTTCGGCCAATTCACAACTGGCTTCTAAGG 161 Query 129425 CGCCAAAATAAATTGTTTCGGCAATTTTGGTGTTCAACACTTTGGCCTGGTCGCTTTCGT 129484 |||| |||||||||||||| ||| | | ||||||| | || | || || || | Sbjct 160 AGCCATAATAAATTGTTTCGAAAATCTGAATATTCAACAATCGTGCTTCTTCACTATCAT 101 Query 129485 ACGGCATACGCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTC 129544 | || ||||| | ||||| ||||| |||||||||| ||| | ||| || |||| Sbjct 100 ATGGATAACGCATTAGAATAAATGCATCGGCTAAACCTTGAACACCGATACCAATCGGTC 41 Query 129545 GATG 129548 |||| Sbjct 40 GATG 37 >seq66633 Length=1367 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 129400 GCCAATTCGCAACTCGCTTCCAATGCGCCAAAATAAATTGTTTCGGCAATTTTGGTGTTC 129459 |||||||| ||||| | ||| ||||| ||| |||| ||||||||| || ||| | ||| Sbjct 347 GCCAATTCACAACTTGATTCTAATGCACCATAATAGATTGTTTCGAATATCTTGATATTC 288 Query 129460 AACACTTTGGCCTGGTCGCTTTCGTACGGCATACGCAACATGGCAAATGTGTCGGCCAAA 129519 | | ||| || | ||||| || || ||| || | |||| ||||| ||| Sbjct 287 ATCTGTTTAGCTTCCGAACTTTCATATGGATAACGTAATAGACTGAATGCATCGGCTAAA 228 Query 129520 CCTTGAATACCCACACCGATGGGTCGATGTTTTCTATTGGATTTTTGTGCCGACAACAAG 129579 || || | ||| | |||||| ||||||||| | ||| || || ||| | || Sbjct 227 CCCTGTACACCAATACCGATTGGTCGATGTCGTAGATTTGAACGTTTTGCTTCCGGTAAT 168 Query 129580 GGATAGTAGTTGATGTCTATAATTTTGTTTAAATTCTT 129617 ||||| || || || ||||||||||||||||| || Sbjct 167 GGATAATAATTACCATCAATAATTTTGTTTAAATTTTT 130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419355857219185