Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq10805 93.3 5e-14 seq42335 86.0 7e-12 >seq10805 Length=234 Score = 93.3 bits (102), Expect = 5e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||| |||||||||||||| || |||||||| || ||||| | || ||| || | Sbjct 234 ACGCAATACCAAATGCAATGTTGATTCTTTTTGAATGTTATAATCGGACAAAGTACGGCC 175 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || | || ||||| || || || | ||||||||| || | ||| | | || || Sbjct 174 ATCTTCCAATTGTTTACCGGCAAAGATCAATCGCTGCTGATCTGGTGGAATACCTTCTTT 115 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| |||||| ||| | | | | || || | ||| || || | || || Sbjct 114 GTCTTGGATTTTAGCTTTTACATTTTCAATGGTATCCGATGGTTCAACTTCCAAAGTAAT 55 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||||||| || | ||||| |||||||||||||| Sbjct 54 GGTTTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 19 >seq42335 Length=1439 Score = 86.0 bits (94), Expect = 7e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 ||||| ||||| ||||| || |||||||| || |||||||||| || || || | Sbjct 245 CGCAATACCAAGTGCAAAGTTGATTCCTTTTGTATGTTGTAATCAGACAATGTTCGGCCA 186 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || | ||||| || || || || | ||| ||||| || | || | | |||||| Sbjct 185 TCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGAGGGATACCTTCCTTG 126 Query 42114 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 42173 ||| |||||| ||| | | | | ||||| || ||| || || | || || Sbjct 125 TCCTGGATTTTGGATTTAACATTTTCGATAGTGTCCGACGGTTCGACTTCCAATGTTATA 66 Query 42174 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || | || ||||||||||||||||| Sbjct 65 GTTTTACCAGTCAATGTTTTTACAAAGATTTGCAT 31 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542718822650160