Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq42335 145 7e-30 seq10805 118 1e-21 seq4062 116 3e-21 >seq42335 Length=1439 Score = 145 bits (160), Expect = 7e-30 Identities = 176/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 45112 TTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGC 45171 |||| || || || | ||| || | ||||| || ||||||||||||||||| |||||| Sbjct 487 TTCCACCACGAAGTCGCAATACCAAATGCAATGTCGATTCCTTTTGGATATTGTAATCGG 428 Query 45172 TGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 | ||| | ||| |||||||| ||||| || | ||||| ||||||||||| |||| Sbjct 427 ACAAAGTTCGACCATCTTCCAATTGCTTTCCGGCAAAAATCAAACGTTGCTGGTCTGGCG 368 Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGA 45291 |||| || ||||||||||| ||||| ||||| ||| | || || || | ||| | Sbjct 367 GAATTCCCTCTTTATCTTGGATTTTAGATTTGACATTTTCGATTGTATCTGATGGCTCCA 308 Query 45292 CTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGACCAA 45351 |||| | || | ||||| ||||| | ||||| || ||||| ||||| ||| || || Sbjct 307 CTTCCAAGGTGATGGTTTTACCGGTCAATGTTTTCACGAAAATCTGCATGCCGCCACGAA 248 Score = 111 bits (122), Expect = 1e-19 Identities = 165/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || | ||| || | |||| |||||||||||||| || || ||||| Sbjct 260 ATGCCGCCACGAAGTCGCAATACCAAGTGCAAAGTTGATTCCTTTTGTATGTTGTAATCA 201 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||| | || | ||| |||||||| ||||| || | |||||||||||||| || | Sbjct 200 --GACAATGTTCGGCCATCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTG 143 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | || || ||||| || || || ||||| ||| | ||| | ||||| || | | Sbjct 142 GAGGGATACCTTCCTTGTCCTGGATTTTGGATTTAACATTTTCGATAGTGTCCGACGGTT 83 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||| | || | ||||| || || | ||||||||||| |||||||| Sbjct 82 CGACTTCCAATGTTATAGTTTTACCAGTCAATGTTTTTACAAAGATTTGCAT 31 >seq10805 Length=234 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATC 45187 ||| || | ||||| |||||||| ||||| || ||||||||| | || ||| Sbjct 231 CAATACCAAATGCAATGTTGATTCTTTTTGAATGTTATAATCGGACAAAGTACGGCCATC 172 Query 45188 GTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATC 45247 ||||||||||| || || | |||||||| ||||| || || ||||| |||||||| || Sbjct 171 TTCCAATTGTTTACCGGCAAAGATCAATCGCTGCTGATCTGGTGGAATACCTTCTTTGTC 112 Query 45248 TTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGT 45307 ||| ||||| ||| | ||| | ||| || || | || ||||| | ||||| || Sbjct 111 TTGGATTTTAGCTTTTACATTTTCAATGGTATCCGATGGTTCAACTTCCAAAGTAATGGT 52 Query 45308 TTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| || | || || ||||| |||||||| Sbjct 51 TTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 19 >seq4062 Length=326 Score = 116 bits (128), Expect = 3e-21 Identities = 154/212 (73%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCG 45188 ||| | ||||| || |||||||||||||| ||||||||| ||| | || || ||| Sbjct 326 CACCAAATGCAAGGTCGATTCCTTTTGGATGTTATAATCG--GACAATGTTCGACCATCT 269 Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248 || |||||||| || || | |||||||| ||||| || || ||||| || |||||||| Sbjct 268 TCTAATTGTTTGCCAGCAAAAATCAATCGCTGCTGATCTGGTGGAATTCCCTCTTTATCC 209 Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308 || ||||| ||| | || | || || || | ||| ||||| | || | ||| Sbjct 208 TGGATTTTCGCTTTTACATTCTCGATCGTATCAGATGGCTCAACTTCCAATGTGATGGTT 149 Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || | |||||| || ||||||||||| Sbjct 148 TTACCAGTCAAAGTTTTGACGAAAATTTGCAT 117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451592165240040