Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12]
72,749 sequences; 43,437,841 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq10805 129 4e-25
seq42335 125 5e-24
seq44706 111 1e-19
seq4062 104 2e-17
>seq10805
Length=234
Score = 129 bits (142), Expect = 4e-25
Identities = 158/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 39504 ACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTC 39563
||||| |||||||||||| || ||||||||| || |||||||||| |||| || |
Sbjct 234 ACGCAATACCAAATGCAATGTTGATTCTTTTTGAATGTTATAATCGGACAAAGTACGGCC 175
Query 39564 ATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTT 39623
||| ||||||||||| ||| |||| || || ||||||||||| | || | ||||||||
Sbjct 174 ATCTTCCAATTGTTTACCGGCAAAGATCAATCGCTGCTGATCTGGTGGAATACCTTCTTT 115
Query 39624 GTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAAT 39683
||| ||||| ||| | | | | || || | ||| || |||||||||||
Sbjct 114 GTCTTGGATTTTAGCTTTTACATTTTCAATGGTATCCGATGGTTCAACTTCCAAAGTAAT 55
Query 39684 TGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
||||| || || || || || || ||||| |||||
Sbjct 54 GGTTTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 19
>seq42335
Length=1439
Score = 125 bits (138), Expect = 5e-24
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564
|||| |||||||||||| || ||| ||||| ||||| ||||||| |||| || ||
Sbjct 473 CGCAATACCAAATGCAATGTCGATTCCTTTTGGATATTGTAATCGGACAAAGTTCGACCA 414
Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624
|| |||||||| || ||| ||||||| ||||| ||||| || | || | || |||||
Sbjct 413 TCTTCCAATTGCTTTCCGGCAAAAATCAAACGTTGCTGGTCTGGCGGAATTCCCTCTTTA 354
Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATT 39684
|| ||||| ||| | | | | ||| |||| ||||| ||||| || ||
Sbjct 353 TCTTGGATTTTAGATTTGACATTTTCGATTGTATCTGATGGCTCCACTTCCAAGGTGATG 294
Query 39685 GTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATGTCG 39723
|||||||| || || ||||| ||||| ||||||||| ||
Sbjct 293 GTTTTACCGGTCAATGTTTTCACGAAAATCTGCATGCCG 255
>seq44706
Length=3097
Score = 111 bits (122), Expect = 1e-19
Identities = 101/126 (80%), Gaps = 1/126 (1%)
Strand=Plus/Minus
Query 42512 ATGTTACCTAAATCACCAAGATGTCGTTCTTCATCATGCGGTCCGCCGTGTTCTTTATGA 42571
||||| ||||||||||||| || |||||||| || |||||||| ||| || | |
Sbjct 1814 ATGTTGCCTAAATCACCAACGTGGCGTTCTTCGTCGGCAGGTCCGCCATGTGTCTTGTTA 1755
Query 42572 AAAGGATTAAAATGTTCACCAGCCGATGTACATCCATTGGTGGTATCTCCAAATTCATGT 42631
|||||||| ||||| ||||||||||||||| ||||||||| | || || |||||||||
Sbjct 1754 AAAGGATTGTAATGTGGACCAGCCGATGTACAACCATTGGTGTTGTCGCCGAATTCATGT 1695
Query 42632 A-TATG 42636
| ||||
Sbjct 1694 ACTATG 1689
>seq4062
Length=326
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 39511 ACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCC 39570
||||||||||| || ||| ||||| || |||||||||| ||| || |||| ||
Sbjct 325 ACCAAATGCAAGGTCGATTCCTTTTGGATGTTATAATCGGACAATGTTCGACCATCTTCT 266
Query 39571 AATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCAT 39630
|||||||| || ||||||| || ||||||||||| | || | || ||||| ||
Sbjct 265 AATTGTTTGCCAGCAAAAATCAATCGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTGG 206
Query 39631 ATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTA 39690
||||| ||| | || | | || || | || || ||||| || || ||||||
Sbjct 205 ATTTTCGCTTTTACATTCTCGATCGTATCAGATGGCTCAACTTCCAATGTGATGGTTTTA 146
Query 39691 CCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| || |||||||| ||||| || ||||||
Sbjct 145 CCAGTCAAAGTTTTGACGAAAATTTGCATG 116
Score = 93.3 bits (102), Expect = 3e-14
Identities = 89/114 (78%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551
||| || || | ||||| ||||||||||||||| |||||| || |||||||| || |
Sbjct 116 GCCACCACGAAGACGCAATACCAAATGCAAAGTTGATTCTTTCTGGATATTATAGTCAGA 57
Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATC 39605
||| || |||| ||||| ||||| ||| ||||||| ||||| ||||||||
Sbjct 56 CAACGTACGACCATCTTCCAACTGTTTACCGGCAAAAATCAAACGTTGCTGATC 3
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347061612234317
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |