Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq10805 129 4e-25 seq42335 125 5e-24 seq44706 111 1e-19 seq4062 104 2e-17 >seq10805 Length=234 Score = 129 bits (142), Expect = 4e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 39504 ACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTC 39563 ||||| |||||||||||| || ||||||||| || |||||||||| |||| || | Sbjct 234 ACGCAATACCAAATGCAATGTTGATTCTTTTTGAATGTTATAATCGGACAAAGTACGGCC 175 Query 39564 ATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTT 39623 ||| ||||||||||| ||| |||| || || ||||||||||| | || | |||||||| Sbjct 174 ATCTTCCAATTGTTTACCGGCAAAGATCAATCGCTGCTGATCTGGTGGAATACCTTCTTT 115 Query 39624 GTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAAT 39683 ||| ||||| ||| | | | | || || | ||| || ||||||||||| Sbjct 114 GTCTTGGATTTTAGCTTTTACATTTTCAATGGTATCCGATGGTTCAACTTCCAAAGTAAT 55 Query 39684 TGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||| || || || || || || ||||| ||||| Sbjct 54 GGTTTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 19 >seq42335 Length=1439 Score = 125 bits (138), Expect = 5e-24 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564 |||| |||||||||||| || ||| ||||| ||||| ||||||| |||| || || Sbjct 473 CGCAATACCAAATGCAATGTCGATTCCTTTTGGATATTGTAATCGGACAAAGTTCGACCA 414 Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624 || |||||||| || ||| ||||||| ||||| ||||| || | || | || ||||| Sbjct 413 TCTTCCAATTGCTTTCCGGCAAAAATCAAACGTTGCTGGTCTGGCGGAATTCCCTCTTTA 354 Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATT 39684 || ||||| ||| | | | | ||| |||| ||||| ||||| || || Sbjct 353 TCTTGGATTTTAGATTTGACATTTTCGATTGTATCTGATGGCTCCACTTCCAAGGTGATG 294 Query 39685 GTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATGTCG 39723 |||||||| || || ||||| ||||| ||||||||| || Sbjct 293 GTTTTACCGGTCAATGTTTTCACGAAAATCTGCATGCCG 255 >seq44706 Length=3097 Score = 111 bits (122), Expect = 1e-19 Identities = 101/126 (80%), Gaps = 1/126 (1%) Strand=Plus/Minus Query 42512 ATGTTACCTAAATCACCAAGATGTCGTTCTTCATCATGCGGTCCGCCGTGTTCTTTATGA 42571 ||||| ||||||||||||| || |||||||| || |||||||| ||| || | | Sbjct 1814 ATGTTGCCTAAATCACCAACGTGGCGTTCTTCGTCGGCAGGTCCGCCATGTGTCTTGTTA 1755 Query 42572 AAAGGATTAAAATGTTCACCAGCCGATGTACATCCATTGGTGGTATCTCCAAATTCATGT 42631 |||||||| ||||| ||||||||||||||| ||||||||| | || || ||||||||| Sbjct 1754 AAAGGATTGTAATGTGGACCAGCCGATGTACAACCATTGGTGTTGTCGCCGAATTCATGT 1695 Query 42632 A-TATG 42636 | |||| Sbjct 1694 ACTATG 1689 >seq4062 Length=326 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 39511 ACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCC 39570 ||||||||||| || ||| ||||| || |||||||||| ||| || |||| || Sbjct 325 ACCAAATGCAAGGTCGATTCCTTTTGGATGTTATAATCGGACAATGTTCGACCATCTTCT 266 Query 39571 AATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCAT 39630 |||||||| || ||||||| || ||||||||||| | || | || ||||| || Sbjct 265 AATTGTTTGCCAGCAAAAATCAATCGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTGG 206 Query 39631 ATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTA 39690 ||||| ||| | || | | || || | || || ||||| || || |||||| Sbjct 205 ATTTTCGCTTTTACATTCTCGATCGTATCAGATGGCTCAACTTCCAATGTGATGGTTTTA 146 Query 39691 CCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 || || |||||||| ||||| || |||||| Sbjct 145 CCAGTCAAAGTTTTGACGAAAATTTGCATG 116 Score = 93.3 bits (102), Expect = 3e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 ||| || || | ||||| ||||||||||||||| |||||| || |||||||| || | Sbjct 116 GCCACCACGAAGACGCAATACCAAATGCAAAGTTGATTCTTTCTGGATATTATAGTCAGA 57 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATC 39605 ||| || |||| ||||| ||||| ||| ||||||| ||||| |||||||| Sbjct 56 CAACGTACGACCATCTTCCAACTGTTTACCGGCAAAAATCAAACGTTGCTGATC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347061612234317