Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq42335 109 4e-19 seq10805 100 2e-16 seq4062 86.0 5e-12 >seq42335 Length=1439 Score = 109 bits (120), Expect = 4e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| |||||||| | || || ||||| ||||||||||| || | | ||||| Sbjct 476 AGTCGCAATACCAAATGCAATGTCGATTCCTTTTGGATATTGTAATCGGACAAAGTTCGA 417 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||| ||||| |||||||| |||| || || || || | |||| ||||| Sbjct 416 CCATCTTCCAATTGCTTTCCGGCAAAAATCAAACGTTGCTGGTCTGGCGGAATTCCCTCT 357 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || || || ||| ||| | | | ||||| | |||||| |||| || Sbjct 356 TTATCTTGGATTTTAGATTTGACATTTTCGATTGTATCTGATGGCTCCACTTCCAAGGTG 297 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || ||||| ||||| || ||||||||||| Sbjct 296 ATGGTTTTACCGGTCAATGTTTTCACGAAAATCTGCAT 259 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 |||||| | || ||||| ||||| || | || || ||||| || ||||||||||| Sbjct 258 GCCGCCACGAAGTCGCAATACCAAGTGCAAAGTTGATTCCTTTTGTATGTTGTAATCAGA 199 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 | |||| | || ||||| ||||| |||||||| |||| ||| || ||||| | || Sbjct 198 CAATGTTCGGCCATCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGAGG 139 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | || |||||||| || || ||| ||| | | || || |||| || || Sbjct 138 GATACCTTCCTTGTCCTGGATTTTGGATTTAACATTTTCGATAGTGTCCGACGGTTCGAC 79 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || ||||| || ||||| ||||||||||| || ||||| Sbjct 78 TTCCAATGTTATAGTTTTACCAGTCAATGTTTTTACAAAGATTTGCAT 31 >seq10805 Length=234 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 48552 CGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCG 48611 ||||| |||||||| | || ||||||||||| || ||||| || | | | || | Sbjct 233 CGCAATACCAAATGCAATGTTGATTCTTTTTGAATGTTATAATCGGACAAAGTACGGCCA 174 Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671 || ||||| || ||||||||||| |||| |||||| ||||| | |||| || || ||| Sbjct 173 TCTTCCAATTGTTTACCGGCAAAGATCAATCGCTGCTGATCTGGTGGAATACCTTCTTTG 114 Query 48672 TCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATC 48731 || || || ||||||| | | | || || | || || |||| ||||| Sbjct 113 TCTTGGATTTTAGCTTTTACATTTTCAATGGTATCCGATGGTTCAACTTCCAAAGTAATG 54 Query 48732 GTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || ||||| || || ||||| || ||||| Sbjct 53 GTTTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 19 >seq4062 Length=326 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 ||||||||| | || || ||||| || || ||||| || | ||||| | || || Sbjct 326 CACCAAATGCAAGGTCGATTCCTTTTGGATGTTATAATCGGACAATGTTCGACCATCTTC 267 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 || || || || ||||| |||| |||||| ||||| | |||| ||||| || || Sbjct 266 TAATTGTTTGCCAGCAAAAATCAATCGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTG 207 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 || || ||||||| | | | || || | ||| || |||| || || ||||| Sbjct 206 GATTTTCGCTTTTACATTCTCGATCGTATCAGATGGCTCAACTTCCAATGTGATGGTTTT 147 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||||||||| || ||||| ||||| Sbjct 146 ACCAGTCAAAGTTTTGACGAAAATTTGCAT 117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380599849890927