Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq33447 217 2e-51 seq42335 136 6e-27 seq23110 95.1 2e-14 >seq33447 Length=1513 Score = 217 bits (240), Expect = 2e-51 Identities = 598/906 (66%), Gaps = 26/906 (3%) Strand=Plus/Plus Query 17862 CTTTTTTG-TATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATT 17920 |||||||| ||||| | || ||| ||||| ||||| | || |||||||||||||| Sbjct 106 CTTTTTTGATATTCGGCAACACGTTTTTCGAAAAAATTCGATTTACCTTCCAATGATATC 165 Query 17921 AAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTATTAATTCGTAT 17980 | ||| ||||| |||||||| |||||||||| |||||| ||||||| Sbjct 166 TGTTCCATGAAATCGAATGGATTCACTGTTTTATAATGTTTTTCACAATCTAATTCGATC 225 Query 17981 AATAATCTATCTGCTACAA-ATTCGACATATTGTGACATCAAATCGCAATTCATACCTAG 18039 ||||| | ||| || |||| |||| | || | | ||| || | |||||||||| | Sbjct 226 AATAAACGATCGGC-ACAATATTCAATGTAATCGGCCATTAATTTCGAATTCATACCGAT 284 Query 18040 TAGTCTGAAAGGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTTAT 18099 | | | |||| ||||| ||| |||||| | || || | ||||| || || Sbjct 285 CAATGATACGGGTAATGCATCGGTAAGAAATTCCTGTTCAATATTAACAGCATCG---AT 341 Query 18100 TATGTTTATTACCCTAGATTTTGGCAAT--TTATTAATTATGTGATTATAATATAATAAA 18157 ||| || | | | | | || | || | | |||| | | ||| || |||||| Sbjct 342 AATGATT-TCAGC--AATTCTTTGTGATGATGGTCGATTACG--AATATGATGGAATAAA 396 Query 18158 ---CACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTT 18214 || ||||||||| ||||| |||||||| | || || ||||| || ||| || Sbjct 397 AGACAGGCAAAATCACAATGTAATCCTTCATCACGTGAAATCAATTCATTCGAAAAGGTA 456 Query 18215 AACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAG 18274 | || ||||||| || | |||||| |||||||| || | || || || ||||| Sbjct 457 AGACCAGGCATTAGGCCACGTTTTTTAAGCCAAAAAATTGCCGCAAATGAACCGGAAAAA 516 Query 18275 AATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTT--ATTGC 18332 || || || || ||| || || || ||||| | ||| ||||| |||| || Sbjct 517 AAGATTCCTTCGACGGCTGCAAATGCAATTAAACGTTCGGCAAA--TGTAACCGAATCAT 574 Query 18333 TCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAG 18392 | || |||| | ||||||| ||| | ||| |||| | | |||| Sbjct 575 CCTGTGTCCAACGTATAGCCCATTTAGCTTTCTTCTCAACACAAGGTAAATTACGGATAG 634 Query 18393 CATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAAT 18452 |||| || | | ||| | ||| || ||| ||| ||| || | || || || |||| Sbjct 635 CATTGAATAGAAAATCCTGTTCATTACGATCGGTTACATATGTATTAATCAATAATGAAT 694 Query 18453 ACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGG 18512 ||||||| ||||| | |||| || || |||||||| | ||| || | | || || | Sbjct 695 ACATTTCCGAATGAACATTTTCGATGGCAATCTGAAATCCATAGAAACAACGTGCTTCAG 754 Query 18513 GATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAG 18572 | ||| | || | | ||| | ||| ||| ||| ||||| || ||||| ||| | Sbjct 755 GTATTTGTACATCACGAATAAAACGTTCAGCCAGATTTTCATTTACGATACCATCACTGG 814 Query 18573 ATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGATTGTTCC 18632 || ||||| ||||| |||| |||||||||||||||||| | || | || |||| Sbjct 815 CGGCAAAAAAAGCCAATACATGCGAAATGAAATGTTTTTCATTTGCATTCAATTTATTCC 874 Query 18633 ATTCATCTAT---ATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGG 18689 | || ||| ||| |||||| |||||||| ||||| || |||| ||||| Sbjct 875 A---ATGTATAAGATCACGGCTTAGATCGACTTCTTCGACGGTCCAGAATGATGCTTCGG 931 Query 18690 CCTGTTTGTACATTTTATAAATATCTTCATGTTGTATAGGAAATAATATATATCGTTTAT 18749 | | ||| |||||| | ||||||| | || |||||| ||||| || | | | || ||| Sbjct 932 CTTTTTTATACATTCTCCAAATATCATGATATTGTATTGGAAACAAAACAAAACGATTAG 991 Query 18750 AATTTT 18755 ||||| Sbjct 992 GATTTT 997 >seq42335 Length=1439 Score = 136 bits (150), Expect = 6e-27 Identities = 140/183 (77%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | |||||||||||||| |||||||| ||||| ||||||||| || Sbjct 31 ATGCAAATCTTTGTAAAAACATTGACTGGTAAAACTATAACATTGGAAGTCGAACCGTCG 90 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| ||| || ||| ||||| || || || ||||| || |||||||| || Sbjct 91 GACACTATCGAAAATGTTAAATCCAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAG 150 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| ||||||| | |||||| ||||| | |||||| | |||| || || ||||| || Sbjct 151 CAACGATTGATCTTTGCCGGAAAGCAATTGGAAGATGGCCGAACATTGTCTGATTACAAC 210 Query 156003 ATA 156005 ||| Sbjct 211 ATA 213 Score = 120 bits (132), Expect = 4e-22 Identities = 156/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | ||||||||||| || ||||| || || || ||||| || || Sbjct 259 ATGCAGATTTTCGTGAAAACATTGACCGGTAAAACCATCACCTTGGAAGTGGAGCCATCA 318 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || ||| || ||| |||||| ||||||||||| || || || ||||| || Sbjct 319 GATACAATCGAAAATGTCAAATCTAAAATCCAAGATAAAGAGGGAATTCCGCCAGACCAG 378 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | ||||||| |||||| ||||| | |||||| ||||||| || ||||| | Sbjct 379 CAACGTTTGATTTTTGCCGGAAAGCAATTGGAAGATGGTCGAACTTTGTCCGATTACA-- 436 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTT 156034 ||||||||| || |||| | ||||| || || Sbjct 437 ATATCCAAAAGGAATCGACATTGCATTTGGTATT 470 >seq23110 Length=276 Score = 95.1 bits (104), Expect = 2e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| || | ||||| |||||||||||||| |||||||| ||||||||| || Sbjct 268 AATGCAAATTTTCGTGAAAACCTTGACTGGAAAAACCATTACATTGGAAGTCGAACCATC 209 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGG 155926 |||| || ||| || ||| |||||| |||||||||||||| Sbjct 208 AGATACCATCGAAAATGTTAAATCTAAAATTCAAGATAAAGAAGG 164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731206463048400