Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq33447 217 3e-51 seq42335 158 2e-33 seq10805 154 3e-32 seq4062 134 2e-26 seq23110 91.5 3e-13 >seq33447 Length=1513 Score = 217 bits (240), Expect = 3e-51 Identities = 597/914 (65%), Gaps = 13/914 (1%) Strand=Plus/Plus Query 38831 TTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAA 38890 |||||| ||||| | ||| |||||||||||| || | ||| ||||| |||||||| Sbjct 108 TTTTTGATATTCGGCAACACGTTTTTCGAAAAAATTCGATTTACCTTCCAATGATATCTG 167 Query 38891 ATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATC-AATACATATA 38949 | ||| ||||| |||||||| || ||||||| |||||| | ||| ||| | | Sbjct 168 TTCCATGAAATCGAATGGATTCACTGTTTTATAATGTTTTTCACA-ATCTAATTCGATCA 226 Query 38950 ATAATCTATCGGCCACAA-ATTCAACATATTGTAACATTAATTCACAATTCATACCCAAT 39008 |||| | |||||| |||| |||||| || | |||||||| |||||||||| | Sbjct 227 ATAAACGATCGGC-ACAATATTCAATGTAATCGGCCATTAATTTCGAATTCATACCGATC 285 Query 39009 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatt 39068 ||| | ||||||||||| || |||||| | ||| || | ||||| | |||| Sbjct 286 AATGATACGGGTAATGCATCGGTAAGAAATTCCTGTTCAATATTAACAGCATCGATAATG 345 Query 39069 atcataattatattattttt--tgataatttatatttaatatgattcgcatataGTAAAC 39126 || | | | ||| ||| | |||| | || |||||||| | ||| | | || Sbjct 346 ATT-TCAGCA-ATTCTTTGTGATGATGGTCGATTACGAATATGATG-GAATAAA--AGAC 400 Query 39127 ATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAAT- 39185 | |||||||| |||||| ||||| || | || || |||||||| | ||||| ||| Sbjct 401 AGGCAAAATCACAATGTAATCCTTCATCACGTGAAATCAATTCATT-CGAAAAGGTAAGA 459 Query 39186 CCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAAT 39245 || ||||||| || | |||||||||||||| |||| ||||| || ||||| || Sbjct 460 CCAGGCATTAGGCCACGTTTTTTAAGCCAAAAAATTGCCGCAAATGAACCGGAAAAAAAG 519 Query 39246 ATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAA 39305 || || || || |||||||| |||| | | | |||| | | |||||| Sbjct 520 ATTCCTTCGACGGCTGCAAATGCAATTAAACGTTCGGCAAATGTAACCGAATCATCCTGT 579 Query 39306 ATCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTA 39365 ||||| ||| ||||| | ||||| || | | | |||||| ||| ||||| || Sbjct 580 GTCCAACGTATAGCCCATTTAGCTTTCTTCTCAACACAAGGTAAATTACGGATAGCATTG 639 Query 39366 AATAATTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAATACATT 39425 |||| || ||||||||| Sbjct 640 AATAGAAAATCCTGTTCATTACGATCGGTTACATATGTATTAATCAATAATGAATACATT 699 Query 39426 TCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGCTTCTGAATAC 39485 || ||||| ||| ||| || || || |||||| ||| || | |||||| | Sbjct 700 TCCGAATGAACATTTTCGATGGCAATCTGAAATCCATAGAAACAACGTGCTTCAGGTATT 759 Query 39486 TGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCG 39545 || || || || || |||||| | | ||| ||| ||| ||||||||| || || Sbjct 760 TGTACATCACGAATAAAACGTTCAGCCAGATTTTCATTTACGATACCATCACTGGCGGCA 819 Query 39546 AAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAATTTTCCCAAGAT 39605 || || || || |||| ||| |||||||||||||| | || || || | |||| | Sbjct 820 AAAAAAGCCAATACATGCGAAATGAAATGTTTTTCATTTGCATTCAATTTATTCCAATGT 879 Query 39606 TCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAAAGATGCTACGGATTTTTTA 39665 |||||| || ||| |||||||| | ||||| || |||||| ||| ||||||| Sbjct 880 ATAAGATCACGGCTTAGATCGACTTCTTCGACGGTCCAGAATGATGCTTCGGCTTTTTTA 939 Query 39666 TACATTTGATATATATCAAAATGTTCAATGGGAAATAACACATATCGTTTAGTAtttttt 39725 |||||| | |||||| || || || ||||| || ||| | || |||| ||||| Sbjct 940 TACATTCTCCAAATATCATGATATTGTATTGGAAACAAAACAAAACGATTAGGATTTTCC 999 Query 39726 tCTAATATCGGTTC 39739 ||||| ||||| Sbjct 1000 CGTAATAATGGTTC 1013 >seq42335 Length=1439 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 ||||| | |||||| ||||| ||||| || || | || || ||||| ||||| || Sbjct 485 CCACCACGAAGTCGCAATACCAAATGCAATGTCGATTCCTTTTGGATATTGTAATCGGAC 426 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 |||| ||| | || |||||||| || || |||||||| || | || ||||| || || Sbjct 425 AAAGTTCGACCATCTTCCAATTGCTTTCCGGCAAAAATCAAACGTTGCTGGTCTGGCGGA 366 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 ||||| ||||||||||| |||||| ||| ||||| || |||||||| | || ||| Sbjct 365 ATTCCCTCTTTATCTTGGATTTTAGATTTGACATTTTCGATTGTATCTGATGGCTCCACT 306 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || | || ||||||||||| || |||||||| | ||| |||||||| Sbjct 305 TCCAAGGTGATGGTTTTACCGGTCAATGTTTTCACGAAAATCTGCAT 259 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || || | |||||| ||||| || || ||||| | || || || || ||||| Sbjct 260 ATGCCGCCACGAAGTCGCAATACCAAGTGCAAAGTTGATTCCTTTTGTATGTTGTAATCA 201 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || | ||| | || |||||||| || || ||||| || |||| || || || || Sbjct 200 GACAATGTTCGGCCATCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGA 141 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || || || ||||| ||| ||||| ||||| || |||| ||| Sbjct 140 GGGATACCTTCCTTGTCCTGGATTTTGGATTTAACATTTTCGATAGTGTCCGACGGTTCG 81 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | || || ||||||||||| |||||||| | || || ||||| Sbjct 80 ACTTCCAATGTTATAGTTTTACCAGTCAATGTTTTTACAAAGATTTGCAT 31 >seq10805 Length=234 Score = 154 bits (170), Expect = 3e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 171855 CGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCG 171914 || ||||| ||||| || || | ||||| ||| |||||||| || |||| || | Sbjct 233 CGCAATACCAAATGCAATGTTGATTCTTTTTGAATGTTATAATCGGACAAAGTACGGCCA 174 Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || |||||||||||||| ||||| || |||| ||| || || ||||| || |||||||| Sbjct 173 TCTTCCAATTGTTTACCGGCAAAGATCAATCGCTGCTGATCTGGTGGAATACCTTCTTTG 114 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| |||||| ||||||||| || ||||| || | ||| ||||| | ||||||| Sbjct 113 TCTTGGATTTTAGCTTTTACATTTTCAATGGTATCCGATGGTTCAACTTCCAAAGTAATG 54 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| ||||| || || || | || || ||||| Sbjct 53 GTTTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 19 >seq4062 Length=326 Score = 134 bits (148), Expect = 2e-26 Identities = 139/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || |||||||| || || | ||| | || || |||||||| ||||||||||| |||| | Sbjct 298 ATGTTATAATCGGACAATGTTCGACCATCTTCTAATTGTTTGCCAGCAAAAATCAATCGC 239 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || || ||||| ||||| |||||||| || ||||| ||||||||| || ||| Sbjct 238 TGCTGATCTGGTGGAATTCCCTCTTTATCCTGGATTTTCGCTTTTACATTCTCGATCGTA 179 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || | || ||||| | || |||||||||||||| || ||||| | ||| || ||| Sbjct 178 TCAGATGGCTCAACTTCCAATGTGATGGTTTTACCAGTCAAAGTTTTGACGAAAATTTGC 119 Query 172068 AT 172069 || Sbjct 118 AT 117 >seq23110 Length=276 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 171966 CCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCT 172025 |||||||||||||| |||||| ||| ||||| || |||||||| | ||| ||||| Sbjct 164 CCTTCTTTATCTTGAATTTTAGATTTAACATTTTCGATGGTATCTGATGGTTCGACTTCC 223 Query 172026 AGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 | ||||||||||| ||||| || ||||| | ||| || |||||| Sbjct 224 AATGTAATGGTTTTTCCAGTCAAGGTTTTCACGAAAATTTGCATT 268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904312903264200