Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq10805 159 3e-34 seq42335 140 2e-28 seq4062 140 2e-28 >seq10805 Length=234 Score = 159 bits (176), Expect = 3e-34 Identities = 165/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| |||||||| | || ||||||||||||||||||||||| | | || || Sbjct 234 ACGCAATACCAAATGCAATGTTGATTCTTTTTGAATGTTATAATCGGACAAAGTACGGCC 175 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | |||||| || ||| | ||||||| |||||||| || |||||||| ||||| Sbjct 174 ATCTTCCAATTGTTTACCGGCAAAGATCAATCGCTGCTGATCTGGTGGAATACCTTCTTT 115 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | ||| ||| ||| |||| | || || || |||| ||||| | ||| || Sbjct 114 GTCTTGGATTTTAGCTTTTACATTTTCAATGGTATCCGATGGTTCAACTTCCAAAGTAAT 55 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||||||| ||||| || ||||| || ||||| Sbjct 54 GGTTTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 19 >seq42335 Length=1439 Score = 140 bits (154), Expect = 2e-28 Identities = 162/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCGAGA 29630 |||| ||||| || | || ||||| ||||| ||||| ||||| | ||||| | || Sbjct 245 CGCAATACCAAGTGCAAAGTTGATTCCTTTTGTATGTTGTAATCAGACAATGTT-CGGCC 187 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | ||| || || ||| | ||||||| ||||||||| || || ||||| || || Sbjct 186 ATCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGAGGGATACCTTCCTT 127 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | ||| ||| ||| |||| | |||||| || |||| ||||| | ||||| Sbjct 126 GTCCTGGATTTTGGATTTAACATTTTCGATAGTGTCCGACGGTTCGACTTCCAATGTTAT 67 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||| ||||| || ||||| ||||| || ||||| Sbjct 66 AGTTTTACCAGTCAATGTTTTTACAAAGATTTGCAT 31 >seq4062 Length=326 Score = 140 bits (154), Expect = 2e-28 Identities = 159/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 29577 CACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCGAGAATCAT 29635 ||||||||| | || ||||| ||||| ||||||||||| | ||||| | ||| ||| | Sbjct 326 CACCAAATGCAAGGTCGATTCCTTTTGGATGTTATAATCGGACAATGTT-CGACCATCTT 268 Query 29636 CGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTT 29695 | | ||||||||||||| | ||||||| |||||||| || ||||| |||||||| || | Sbjct 267 CTAATTGTTTGCCAGCAAAAATCAATCGCTGCTGATCTGGTGGAATTCCCTCTTTATCCT 208 Query 29696 GTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTT 29755 | | ||| ||| ||| | || | || ||||| | || ||||| | || || |||| Sbjct 207 GGATTTTCGCTTTTACATTCTCGATCGTATCAGATGGCTCAACTTCCAATGTGATGGTTT 148 Query 29756 TGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | ||||| || ||||| || || || ||||| Sbjct 147 TACCAGTCAAAGTTTTGACGAAAATTTGCAT 117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384877653702609