Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq14022 134 2e-26 seq40607 86.0 8e-12 >seq14022 Length=1756 Score = 134 bits (148), Expect = 2e-26 Identities = 187/258 (72%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 171608 TTAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAG 171667 || |||| || |||||| |||| |||||||||||||||| ||| ||||| || | || Sbjct 1054 TTGAAGAGCTATTATGGTTTATACAAGGTTCAACTGATTCGAAAAAATTATCCGAAAAAG 1113 Query 171668 GTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTG 171727 | || ||| | ||| ||| ||||| || | |||||| | ||| || ||||| | Sbjct 1114 GCGTAAAAATCTGGGATGCAAATGGATCGAGAGAATTTCTTGATAGTCTTGGATTTACCG 1173 Query 171728 AAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTC 171787 | | ||||||| ||| ||||||| | ||||| ||||||||||||||| || || Sbjct 1174 ATCGTCAAGAAGGAGATCTAGGTCCGGTATATGGTTTTCAATGGAGACATTTTGGTGCCG 1233 Query 171788 AATATATCGACTGTTATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAACTA 171847 ||||| || |||||| ||||| | |||||||| || || ||||||| | ||||| Sbjct 1234 AATATCGAGATAATTATACCGATTATAATGGACAAGGTGTTGATCAATTAAAAC-AACTA 1292 Query 171848 TTA-ATACTTTACAAAAC 171864 || |||| | |||||| Sbjct 1293 ATACATACGAT-CAAAAC 1309 >seq40607 Length=2432 Score = 86.0 bits (94), Expect = 8e-12 Identities = 125/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 165161 TTAAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAAC 165220 ||||||| |||||||| ||| | || | ||||| | | |||| | ||||||||| Sbjct 1141 TTAAAGTGGCTCAATTGGCTGGTTCGGTCGGCGAACATAGTGCTTATCATCATGGTGAAG 1082 Query 165221 AAA-ATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATA 165279 | |||||| | | || ||||| || || ||| ||||||| |||| |||||||| Sbjct 1081 TGTCACTTATGTCGA-CAATCATTAATTTAGCGCAAAATTTTGTCGGTAGTAATAATATT 1023 Query 165280 GCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGAT 165333 || | |||| |||||||||||||||||| || |||| ||||||||| Sbjct 1022 AATCTATTGCAACCGATTGGTCAATTTGGTACCAGGCTACAAGGTGGTAAAGAT 969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627959637296640