Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq42335 131 1e-25 seq10805 125 5e-24 seq4062 104 2e-17 seq23110 86.0 4e-12 >seq42335 Length=1439 Score = 131 bits (144), Expect = 1e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594 || || ||||| || | ||| || ||||||||||||||||| || | ||| || | Sbjct 245 CGCAATACCAAGTGCAAAGTTGATTCCTTTTGTATGTTGTAATCAGACAATGTTCGGCCA 186 Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654 || |||||||| ||||||||||| ||||| || ||||||||| | || | |||||| ||| Sbjct 185 TCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGAGGGATACCTTCCTTG 126 Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713 || ||||| | || ||||| || | ||||| | ||| || || | || || Sbjct 125 TCCTGGATTTT-GGATTTAACATTTTCGATAGTGTCCGACGGTTCGACTTCCAATGTTAT 67 Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||||||| || || |||||||||||||| ||||| Sbjct 66 AGTTTTACCAGTCAATGTTTTTACAAAGATTTGCAT 31 Score = 113 bits (124), Expect = 3e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594 || || |||||||| | || || ||||| || ||||||||||| | || || | Sbjct 473 CGCAATACCAAATGCAATGTCGATTCCTTTTGGATATTGTAATCGGACAAAGTTCGACCA 414 Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654 || |||||||| |||||||||||||||||||| ||||| ||| |||| | || ||||| Sbjct 413 TCTTCCAATTGCTTTCCGGCAAAAATCAAACGTTGCTGGTCTGGCGGAATTCCCTCTTTA 354 Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713 || ||||| | || |||| || | || || || ||||| || | ||||| Sbjct 353 TCTTGGATTTT-AGATTTGACATTTTCGATTGTATCTGATGGCTCCACTTCCAAGGTGAT 295 Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||||||| || || ||||| || || |||||||| Sbjct 294 GGTTTTACCGGTCAATGTTTTCACGAAAATCTGCAT 259 >seq10805 Length=234 Score = 125 bits (138), Expect = 5e-24 Identities = 160/218 (73%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| || |||||||| | || |||||||| ||||| |||||||| | || || | Sbjct 234 ACGCAATACCAAATGCAATGTTGATTCTTTTTGAATGTTATAATCGGACAAAGTACGGCC 175 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || ||||||||||| |||||||| ||||| |||||||||||| | || | ||||||||| Sbjct 174 ATCTTCCAATTGTTTACCGGCAAAGATCAATCGCTGCTGATCTGGTGGAATACCTTCTTT 115 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| ||||| | || |||| || | ||| || || ||| || || | || | Sbjct 114 GTCTTGGATTTT-AGCTTTTACATTTTCAATGGTATCCGATGGTTCAACTTCCAAAGTAA 56 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | ||||| || || || || || |||||||| |||||| Sbjct 55 TGGTTTTGCCAGTCAAGGTCTTGACAAAGATTTGCATA 18 >seq4062 Length=326 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||||||| | || || ||||| ||||| |||||||| | ||| || | || || Sbjct 326 CACCAAATGCAAGGTCGATTCCTTTTGGATGTTATAATCGGACAATGTTCGACCATCTTC 267 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 |||||||| || ||||||||||| |||||||||||| | || | || ||||| || Sbjct 266 TAATTGTTTGCCAGCAAAAATCAATCGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTG 207 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 |||||| | || |||| || | || || || || || || | ||||| |||| Sbjct 206 GATTTTC-GCTTTTACATTCTCGATCGTATCAGATGGCTCAACTTCCAATGTGATGGTTT 148 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || || ||||| || || || ||||| Sbjct 147 TACCAGTCAAAGTTTTGACGAAAATTTGCAT 117 >seq23110 Length=276 Score = 86.0 bits (94), Expect = 4e-12 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 |||||||| ||||||||||| || | ||||| | || ||||| ||||| || |||||| Sbjct 10 TCTTTTTGGATGTTGTAATCCGACAAGGTGCGGCCATCTTCCAACTGTTTACCAGCAAAA 69 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCT 33648 |||||||| ||||||||| | || | |||| Sbjct 70 ATCAAACGTTGCTGATCTGGTGGGATACCT 99 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328412561686080