Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12]
72,749 sequences; 43,437,841 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq42335 131 1e-25
seq10805 125 5e-24
seq4062 104 2e-17
seq23110 86.0 4e-12
>seq42335
Length=1439
Score = 131 bits (144), Expect = 1e-25
Identities = 160/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594
|| || ||||| || | ||| || ||||||||||||||||| || | ||| || |
Sbjct 245 CGCAATACCAAGTGCAAAGTTGATTCCTTTTGTATGTTGTAATCAGACAATGTTCGGCCA 186
Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654
|| |||||||| ||||||||||| ||||| || ||||||||| | || | |||||| |||
Sbjct 185 TCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGAGGGATACCTTCCTTG 126
Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713
|| ||||| | || ||||| || | ||||| | ||| || || | || ||
Sbjct 125 TCCTGGATTTT-GGATTTAACATTTTCGATAGTGTCCGACGGTTCGACTTCCAATGTTAT 67
Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|||||||| || || |||||||||||||| |||||
Sbjct 66 AGTTTTACCAGTCAATGTTTTTACAAAGATTTGCAT 31
Score = 113 bits (124), Expect = 3e-20
Identities = 156/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594
|| || |||||||| | || || ||||| || ||||||||||| | || || |
Sbjct 473 CGCAATACCAAATGCAATGTCGATTCCTTTTGGATATTGTAATCGGACAAAGTTCGACCA 414
Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654
|| |||||||| |||||||||||||||||||| ||||| ||| |||| | || |||||
Sbjct 413 TCTTCCAATTGCTTTCCGGCAAAAATCAAACGTTGCTGGTCTGGCGGAATTCCCTCTTTA 354
Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713
|| ||||| | || |||| || | || || || ||||| || | |||||
Sbjct 353 TCTTGGATTTT-AGATTTGACATTTTCGATTGTATCTGATGGCTCCACTTCCAAGGTGAT 295
Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|||||||| || || ||||| || || ||||||||
Sbjct 294 GGTTTTACCGGTCAATGTTTTCACGAAAATCTGCAT 259
>seq10805
Length=234
Score = 125 bits (138), Expect = 5e-24
Identities = 160/218 (73%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593
||| || |||||||| | || |||||||| ||||| |||||||| | || || |
Sbjct 234 ACGCAATACCAAATGCAATGTTGATTCTTTTTGAATGTTATAATCGGACAAAGTACGGCC 175
Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653
|| ||||||||||| |||||||| ||||| |||||||||||| | || | |||||||||
Sbjct 174 ATCTTCCAATTGTTTACCGGCAAAGATCAATCGCTGCTGATCTGGTGGAATACCTTCTTT 115
Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712
||| ||||| | || |||| || | ||| || || ||| || || | || |
Sbjct 114 GTCTTGGATTTT-AGCTTTTACATTTTCAATGGTATCCGATGGTTCAACTTCCAAAGTAA 56
Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| ||||| || || || || || |||||||| ||||||
Sbjct 55 TGGTTTTGCCAGTCAAGGTCTTGACAAAGATTTGCATA 18
>seq4062
Length=326
Score = 104 bits (114), Expect = 2e-17
Identities = 151/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599
||||||||| | || || ||||| ||||| |||||||| | ||| || | || ||
Sbjct 326 CACCAAATGCAAGGTCGATTCCTTTTGGATGTTATAATCGGACAATGTTCGACCATCTTC 267
Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659
|||||||| || ||||||||||| |||||||||||| | || | || ||||| ||
Sbjct 266 TAATTGTTTGCCAGCAAAAATCAATCGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTG 207
Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718
|||||| | || |||| || | || || || || || || | ||||| ||||
Sbjct 206 GATTTTC-GCTTTTACATTCTCGATCGTATCAGATGGCTCAACTTCCAATGTGATGGTTT 148
Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|||| || || ||||| || || || |||||
Sbjct 147 TACCAGTCAAAGTTTTGACGAAAATTTGCAT 117
>seq23110
Length=276
Score = 86.0 bits (94), Expect = 4e-12
Identities = 73/90 (81%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618
|||||||| ||||||||||| || | ||||| | || ||||| ||||| || ||||||
Sbjct 10 TCTTTTTGGATGTTGTAATCCGACAAGGTGCGGCCATCTTCCAACTGTTTACCAGCAAAA 69
Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCT 33648
|||||||| ||||||||| | || | ||||
Sbjct 70 ATCAAACGTTGCTGATCTGGTGGGATACCT 99
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328412561686080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |