Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq42335 122 8e-23 seq4062 122 8e-23 seq33447 107 2e-18 seq10805 93.3 4e-14 >seq42335 Length=1439 Score = 122 bits (134), Expect = 8e-23 Identities = 170/236 (72%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 |||||| | || || |||||||| ||||| ||| | ||||| | ||||| || |||| Sbjct 258 CATGCAGATTTTCGTGAAAACATTGACCGGTAAAACCATCACCTTGGAAGTGGA-GCCAT 316 Query 25234 C-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATC 25292 | ||||| ||||| | || ||| ||||| ||||||||||| || ||||| || | Sbjct 317 CAGATACAATCGAAAATGTCAAATCTAAAATCCAAGATAAAGAGGGAATTCCGCCAGACC 376 Query 25293 AGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACA 25352 ||||| | | |||| | ||| || ||| | ||||||| | ||| | | |||||||| Sbjct 377 AGCAACGTTTGATTTTTGCCGGAAAGCAATTGGAAGATGGTCGAACTTTGTCCGATTACA 436 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATGA 25408 |||| ||||| ||||| || | ||||| || || || | | || ||||| ||| Sbjct 437 ATATCCAAAAGGAATCGACATTGCATTTGGTATTGCGACTTCGTGGTGGAAACTGA 492 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | |||||||||||||| || || ||| | || || | ||||||||| | Sbjct 30 CATGCAAATCTTTGTAAAAACATTGACTGGTAAAACTATAACATTGGAAGTCGAACCGTC 89 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || |||||||| | || ||| ||||| || || || ||||| || || ||||| Sbjct 90 GGACACTATCGAAAATGTTAAATCCAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCA 149 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGA--AATGTCAGCGATTAC 25351 |||| || | || | | ||| || ||| | ||||||| || | |||| |||||| Sbjct 150 GCAACGATTGATCTTTGCCGGAAAGCAATTGGAAGATGGCCGAACATTGTC--TGATTAC 207 Query 25352 AATATTCAAAAAGAATCCAC 25371 || || ||||| ||||| || Sbjct 208 AACATACAAAAGGAATCAAC 227 >seq4062 Length=326 Score = 122 bits (134), Expect = 8e-23 Identities = 158/214 (74%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | || || ||||| || || || ||| | ||||| | ||||| || |||| Sbjct 116 CATGCAAATTTTCGTCAAAACTTTGACTGGTAAAACCATCACATTGGAAGTTGA-GCCAT 174 Query 25234 C-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATC 25292 | ||||| |||||| | |||||| ||||| ||||||||||| || || || |||| Sbjct 175 CTGATACGATCGAGAATGTAAAAGCGAAAATCCAGGATAAAGAGGGAATTCCACCAGATC 234 Query 25293 AGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGA--AATGTCAGCGATTA 25350 |||| || | |||| | ||||||||| | ||||||| | || | |||| |||||| Sbjct 235 AGCAGCGATTGATTTTTGCTGGCAAACAATTAGAAGATGGTCGAACATTGTC--CGATTA 292 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTG 25384 || || ||||| ||||| ||| | ||||| ||| Sbjct 293 TAACATCCAAAAGGAATCGACCTTGCATTTGGTG 326 >seq33447 Length=1513 Score = 107 bits (118), Expect = 2e-18 Identities = 312/469 (67%), Gaps = 26/469 (6%) Strand=Plus/Plus Query 110036 TATTCGCCTACACGTTTTTCGAAAAAATTAGTTTTGCCCTCGAGAGATATATTATTCATA 110095 |||||| | |||||||||||||||||||| | ||| || || | ||||| | | ||| Sbjct 115 TATTCGGCAACACGTTTTTCGAAAAAATTCGATTTACCTTCCAATGATATCTGTTCCATG 174 Query 110096 AACTCGAAAGGATTGACAGTGTTAAAGTGTTTGTCGTAGCCCAATTCGAATAGCAATCGA 110155 || ||||| ||||| || || ||| | ||||| || | | ||||||| | || ||| Sbjct 175 AAATCGAATGGATTCACTGTTTTATAATGTTTTTCACAATCTAATTCGATCAATAAACGA 234 Query 110156 TCCGCCACAA-ATTCAATATACTCGCACATGGACTGTACGTTCATGCCTAACATGGCAAC 110214 | || ||||| ||||||| || ||| ||| | | ||||| || | || | || Sbjct 235 T-CGGCACAATATTCAATGTAATCGGCCATTAATTTCGAATTCATACCGATCAATGATAC 293 Query 110215 TGGTAGAGCGGTAGTaaaaaaaTCCTTTTCAATGTCGACAGCCTCTACGAACATACTCAA 110274 |||| || |||| ||| |||| |||||| | ||||| || | | || ||| Sbjct 294 GGGTAATGCATCGGTAAGAAATTCCTGTTCAATATTAACAGCATCGATAATGAT-TTCAG 352 Query 110275 CACCTGGCTCTTATGAAGCTTGTTCTTTTCGGGAATAT-ATCTATTATAGTAGAGGCAGG 110333 || | || || ||| | | || || | |||||| || | || | || |||| Sbjct 353 CAATT--CT-TTGTGATGATGGTCGATTAC--GAATATGATGGAATA----AAAGACAGG 403 Query 110334 CAAAATCAGTGTGTAATCCTTCATCTCTAGAAATGAGTTCGTTGCTGTATGTCAAACCGG 110393 |||||||| |||||||||||||| | ||||| | ||| || | || | ||| | Sbjct 404 CAAAATCACAATGTAATCCTTCATCACGTGAAATCAATTCATTCGAAAAGGTAAGACCAG 463 Query 110394 G---TAGAGCCCCTTTTTTGTGTCTTTTATGTAGTAGATTGCGGCAAAACTTCCGG--AA 110448 | ||| ||| | ||| ||| | | | ||||| ||||| |||| || Sbjct 464 GCATTAG-GCCACGTTT-------TTTAAGCCAAAAAATTGCCGCAAATGAACCGGAAAA 515 Query 110449 AAATACTCCTTCGACGATTGCAAAAGCGACCATGCGCTCGGCAAATGTA 110497 ||| | |||||||||| |||||| || | | || |||||||||||| Sbjct 516 AAAGATTCCTTCGACGGCTGCAAATGCAATTAAACGTTCGGCAAATGTA 564 >seq10805 Length=234 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || || || || || ||| | || || | ||||| ||| ||| | Sbjct 19 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAAACCATTACTTTGGAAGTTGAA-CCATC 77 Query 25235 G-ATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 | |||| || || | |||||| ||||| || ||||| ||||| || || ||||| Sbjct 78 GGATACCATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGTATTCCACCAGATCA 137 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 ||| || | || | | ||| |||||| | ||||||| | | | | |||||| || Sbjct 138 GCAGCGATTGATCTTTGCCGGTAAACAATTGGAAGATGGCCGTACTTTGTCCGATTATAA 197 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 |||||||||||||| || | ||||| || || Sbjct 198 CATTCAAAAAGAATCAACATTGCATTTGGTATT 230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444689647843680