Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq22487 145 1e-29 seq66633 120 4e-22 seq40607 82.4 1e-10 >seq22487 Length=722 Score = 145 bits (160), Expect = 1e-29 Identities = 283/410 (69%), Gaps = 10/410 (2%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| || || || || || ||||||||| ||||||| ||||| | || || || || || Sbjct 420 GTAAATATTAGTGGTATAGGGTTCAAAGGATTCATTGTTACCAAGAATCTGGGCAGTCGA 361 Query 110767 GGCTGTTGGCATTGGTGCCATCAA--AAGACTGTTACGAAGACCCTTCTCCTTGATGCGT 110824 ||||| |||||||| || | ||| ||| || || |||| ||| | || ||| || Sbjct 360 AGCTGTGGGCATTGGAGCTA-CAAGCAAG-CTATTTCGAATACCATGCTTTGCGATTCGA 303 Query 110825 TCCTTGAGAACATCCCAGT-CGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883 || | | ||| ||| | | | || |||||| | |||| ||||||||||||| Sbjct 302 GATTTCAAATCATTCCAATTCCAAAGTGTTGTTGGTTGCCGATTCC-ACATGTCAAACTG 244 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943 || | |||| |||| | || || || ||| | |||||||| | ||| | ||| || Sbjct 243 TAGAATACCTTTGGACACTGGTGATCCTTCATATGTTTCATATGGACCATATTGTTCGGC 184 Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003 ||||||||| || || || | ||| | | ||| || ||||| || || || ||||| Sbjct 183 CAATTCACAACTGGCTTCTAAGGAGCCATAATAAATTGTTTCGAAAATCTGAATATTCAA 124 Query 111004 C--TCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061 | || | ||||| || |||| ||| || || | ||||||| |||| || | | Sbjct 123 CAATCGT--GCTTCTTCACTATCATATGGATAACGCATTAGAATAAATGCATCGGCTAAA 66 Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGC 111111 ||||||||||| | |||||| |||| || || | ||| || | ||| || Sbjct 65 CCTTGAACACCGATACCAATCGGTCGATGACGAAGATTCGAATATCGAGC 16 >seq66633 Length=1367 Score = 120 bits (132), Expect = 4e-22 Identities = 379/577 (66%), Gaps = 24/577 (4%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| || || | ||| |||||||| || ||||||||||||| | || ||||| || || Sbjct 582 GTAAATATTCGATGTATATGGTTCGAATGATTCATTATTACCAAGTATCTGTGCAGTTGA 523 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCC---TTCTCC-TTGATGC 110822 ||||||||||||||||||| ||| | ||| || | | ||| || | || || Sbjct 522 TGCTGTTGGCATTGGTGCCACCAATAAACTATTTCTTACACCAAATTTAGCAATTTTTGA 463 Query 110823 GTTCCTTGAGAACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAA 110880 ||| | ||| ||| | | || | || ||||| | || | |||||| ||| | Sbjct 462 TTTCAATT----CATTCCAATTCCAAAGATCAG-TTGGTGT-ACGATTCCACATATCATA 409 Query 110881 CTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC 110940 || || | |||| ||| | || || || ||| | |||||||| | || | ||| Sbjct 408 TTGTAGAATACCTTTGGAAACCGGTGATCCATCATATGTTTCATATGGCCCATATTTTTC 349 Query 110941 AGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 111000 ||||||||||| || | || | | | | ||| || ||||| || || ||| Sbjct 348 CGCCAATTCACAACTTGATTCTAATGCACCATAATAGATTGTTTCGAATATCTTGATATT 289 Query 111001 CATCTCCTTGGCTTC--ATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCG 111058 ||||| || ||||| | || ||| ||| || || | | | | ||| |||| || Sbjct 288 CATCTGTTTAGCTTCCGAACTT--TCATATGGATAACGTAATAGACTGAATGCATCGGCT 231 Query 111059 AGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGAC--TTTCGCG--CAGT 111114 | ||| || ||||| | ||| || |||| ||||| | ||| || ||| || | || Sbjct 230 AAACCCTGTACACCAATACCGATTGGTCGATGTCGTAGATTTGAACGTTTTGCTTCCGGT 171 Query 111115 CTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGT 111174 | |||||| |||| | ||||| | | ||||| |||||| || | | || Sbjct 170 ----AATGGATAATAATTACCATCAATAATTTTGTTTAAATTTTTTGTCATTACTTTAAC 115 Query 111175 GATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAG 111234 ||||| | ||||||||||||||||||| || | | | | || ||| | ||| | Sbjct 114 AATTTCTTTAAGTTTTTCATAATCAAAATGGCCAATTTTTGAATCAACAAAACGTGGTAA 55 Query 111235 GGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCC 111271 | |||||||| ||||| || || || | |||||| Sbjct 54 TGAAATTGATGCTAAATTACAGACGGCAATTTCATCC 18 >seq40607 Length=2432 Score = 82.4 bits (90), Expect = 1e-10 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 182673 GAAGCGTCCCGAACATTCTTACATTTACCGCGAAGTGGGAACACACCGTAGTGATCACGA 182732 || || || || |||||| |||||| |||||||| || |||||||| | |||||| Sbjct 1942 GATGCTTCACGGACATTCAGCATTTTACCACGAAGTGGAAATACACCGTATTTATCACGG 2001 Query 182733 CCAACGACAGAGAGACCCGCAACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATG 182792 ||||| || | || ||||| | || | ||| ||||||||||| ||||| | || Sbjct 2002 CCAACTACTCCTAATCCGGCAACAACCAGTGATTTTGCCGAATCACCTTCCGTAAGGATT 2061 Query 182793 AGAGTACACTTTCCAGATTGTGCCGTACCCGCCTTGTTCGCGTCATCCAACTTGGGAATA 182852 || ||||| | || | | || || || | || || || |||| || |||||| Sbjct 2062 AGTGTACAATCGATGGAATTTTTAGTGCCAGCATCATTTGCATCTTCCAGTTTAGGAATA 2121 Query 182853 CCGGTAATTTTGG 182865 || |||| ||||| Sbjct 2122 CCAGTAAGTTTGG 2134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627460891250400