Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12]
72,749 sequences; 43,437,841 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq10805 147 2e-30
seq42335 136 5e-27
seq4062 125 8e-24
>seq10805
Length=234
Score = 147 bits (162), Expect = 2e-30
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||||||||| | || ||||| || |||||| | || ||||| ||
Sbjct 19 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAAACCATTACTTTGGAAGTTGAACCATCG 78
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| |||| | || |||||||| || ||||| || || ||||| ||||| |||
Sbjct 79 GATACCATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGTATTCCACCAGATCAG 138
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | || ||||| ||||| ||| | || |||| ||||| | | || |||||
Sbjct 139 CAGCGATTGATCTTTGCCGGTAAACAATTGGAAGATGGCCGTACTTTGTCCGATTATAAC 198
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGT 27621
| ||||| ||||| || | ||| | || ||||||
Sbjct 199 ATTCAAAAAGAATCAACATTGCATTTGGTATTGCGT 234
>seq42335
Length=1439
Score = 136 bits (150), Expect = 5e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || || || | ||||| || || || || | || || ||| ||
Sbjct 259 ATGCAGATTTTCGTGAAAACATTGACCGGTAAAACCATCACCTTGGAAGTGGAGCCATCA 318
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | |||| | || ||||||| || || || ||||||||||| |||||||||
Sbjct 319 GATACAATCGAAAATGTCAAATCTAAAATCCAAGATAAAGAGGGAATTCCGCCAGACCAG 378
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||| | |||||||| || |||||| | || |||| ||| || | | || || |||
Sbjct 379 CAACGTTTGATTTTTGCCGGAAAGCAATTGGAAGATGGTCGAACTTTGTCCGATTACAAT 438
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
||||||||||||| || | ||| | || ||||| ||||| ||||||
Sbjct 439 ATCCAAAAGGAATCGACATTGCATTTGGTATTGCGACTTCGTGGTGGA 486
Score = 104 bits (114), Expect = 3e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||| || || | || || || ||||| || | || || || |
Sbjct 31 ATGCAAATCTTTGTAAAAACATTGACTGGTAAAACTATAACATTGGAAGTCGAACCGTCG 90
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | |||| | || | ||||| ||||||||||| || || |||||||| |||
Sbjct 91 GACACTATCGAAAATGTTAAATCCAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAG 150
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| || | || ||||| || |||||| | || |||| || || | | || || ||
Sbjct 151 CAACGATTGATCTTTGCCGGAAAGCAATTGGAAGATGGCCGAACATTGTCTGATTACAAC 210
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||||||||||| ||| | || | || ||||| ||||| || ||
Sbjct 211 ATACAAAAGGAATCAACTTTGCACTTGGTATTGCGACTTCGTGGCGG 257
>seq4062
Length=326
Score = 125 bits (138), Expect = 8e-24
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || ||||| || | || || || || || || | || |||||| || |
Sbjct 117 ATGCAAATTTTCGTCAAAACTTTGACTGGTAAAACCATCACATTGGAAGTTGAGCCATCT 176
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | ||| | || || ||||| ||||| || ||||||||||| ||||| |||
Sbjct 177 GATACGATCGAGAATGTAAAAGCGAAAATCCAGGATAAAGAGGGAATTCCACCAGATCAG 236
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | ||||||||||| || ||| | || |||| ||| || | | || |||||
Sbjct 237 CAGCGATTGATTTTTGCTGGCAAACAATTAGAAGATGGTCGAACATTGTCCGATTATAAC 296
Query 27586 GTCCAAAAGGAATCCAC 27602
||||||||||||| ||
Sbjct 297 ATCCAAAAGGAATCGAC 313
Score = 87.8 bits (96), Expect = 2e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 27520 GACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGAC 27579
|| ||||| ||| | |||||||| ||||| || | || |||| |||||| | | |||
Sbjct 3 GATCAGCAACGTTTGATTTTTGCCGGTAAACAGTTGGAAGATGGTCGTACGTTGTCTGAC 62
Query 27580 TATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||| |||| || ||||| ||| | ||| | || ||||||||||| |||||
Sbjct 63 TATAATATCCAGAAAGAATCAACTTTGCATTTGGTATTGCGTCTTCGTGGTGG 115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 569791781108880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |