Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq10805 156 4e-33 seq42335 145 7e-30 seq4062 140 3e-28 >seq10805 Length=234 Score = 156 bits (172), Expect = 4e-33 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || |||| ||||| | |||||| | ||||| ||||| || Sbjct 19 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAAACCATTACTTTGGAAGTTGAACCATCG 78 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| ||||| |||||||||||||| || ||||| ||||| Sbjct 79 GATACCATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGTATTCCACCAGATCAG 138 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||||| |||||||||||||| | || | |||||||| ||| Sbjct 139 CAGCGATTGATCTTTGCCGGTAAACAATTGGAAGATGGCCGTACTTTGTCCGATTATAAC 198 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGT 27203 |||||||| || || || || |||||||| |||||| Sbjct 199 ATTCAAAAAGAATCAACATTGCATTTGGTATTGCGT 234 >seq42335 Length=1439 Score = 145 bits (160), Expect = 7e-30 Identities = 173/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || ||||||||| || || ||||| ||||||| || | || || | |||||||| || Sbjct 255 CGGCATGCAGATTTTCGTGAAAACATTGACCGGTAAAACCATCACCTTGGAAGTGGAGCC 314 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 || || | || || | |||||| ||||| ||||| ||||| || || || || || Sbjct 315 ATCAGATACAATCGAAAATGTCAAATCTAAAATCCAAGATAAAGAGGGAATTCCGCCAGA 374 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATT 27162 || || ||||| || | ||||| || ||||||||||| | |||| | || ||||||| Sbjct 375 CCAGCAACGTTTGATTTTTGCCGGAAAGCAATTGGAAGA-TGGTCGAACTTTGTCCGATT 433 Query 27163 ACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||| || |||||||| ||||| || |||||||| ||||| | || ||||| Sbjct 434 ACAATATCCAAAAGGAATCGACATTGCATTTGGTATTGCGACTTCGTGGTGG 485 Score = 141 bits (156), Expect = 8e-29 Identities = 172/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || ||||||||||| |||| || || |||| || | ||||| |||||||| Sbjct 30 CATGCAAATCTTTGTAAAAACATTGACTGGTAAAACTATAACATTGGAAGTCGAACCGTC 89 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | || ||| ||||| || ||||| ||||| || || || ||||| Sbjct 90 GGACACTATCGAAAATGTTAAATCCAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCA 149 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACA 27165 || || || || | ||||| || ||||||||||| | ||| | || || ||||||| Sbjct 150 GCAACGATTGATCTTTGCCGGAAAGCAATTGGAAGA-TGGCCGAACATTGTCTGATTACA 208 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||| |||||||| || || || || ||||| ||||| | || || ||||| Sbjct 209 ACATACAAAAGGAATCAACTTTGCACTTGGTATTGCGACTTCGTGGCGGCAT 260 >seq4062 Length=326 Score = 140 bits (154), Expect = 3e-28 Identities = 159/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || || |||||| |||| || || | || || | ||||| || || || Sbjct 116 CATGCAAATTTTCGTCAAAACTTTGACTGGTAAAACCATCACATTGGAAGTTGAGCCATC 175 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || |||| |||| || ||| ||||| || || ||||| || || ||||| ||||| Sbjct 176 TGATACGATCGAGAATGTAAAAGCGAAAATCCAGGATAAAGAGGGAATTCCACCAGATCA 235 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACA 27165 ||||| || || | || ||||||||||| ||||| | |||| | || |||||||| | Sbjct 236 GCAGCGATTGATTTTTGCTGGCAAACAATTAGAAGA-TGGTCGAACATTGTCCGATTATA 294 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGT 27196 |||| |||||||| |||||||| |||||||| Sbjct 295 ACATCCAAAAGGAATCGACCTTGCATTTGGT 325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434522901516480