Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq42335 143 6e-29 seq10805 125 2e-23 seq72749 123 6e-23 seq4062 116 9e-21 seq65859 109 1e-18 >seq42335 Length=1439 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||| || || | ||| | ||| ||||| ||||| | |||||||| | ||| || Sbjct 252 ACGAAGTCGCAATACCAAGTGCAAAGTTGATTCCTTTTGTATGTTGTAATCAGACAATGT 193 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || |||||||| | ||||| || || ||||| | |||||| || || || || ||||| Sbjct 192 TCGGCCATCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGAGGGATACC 133 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| ||||| || || ||| |||||| ||||| || | ||| || || || Sbjct 132 TTCCTTGTCCTGGATTTTGGATTTAACATTTTCGATAGTGTCCGACGGTTCGACTTCCAA 73 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || || ||||| ||||||| || | |||||| Sbjct 72 TGTTATAGTTTTACCAGTCAATGTTTTTACAAAGATTTGCAT 31 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||| || || | || | || ||||| ||||||| ||||||||||| |||||| Sbjct 480 ACGAAGTCGCAATACCAAATGCAATGTCGATTCCTTTTGGATATTGTAATCGGACAAAGT 421 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || |||||||| | ||||| || || || || | ||||| ||||| |||||||| || Sbjct 420 TCGACCATCTTCCAATTGCTTTCCGGCAAAAATCAAACGTTGCTGGTCTGGCGGAATTCC 361 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 || || |||||||| || || ||| |||||| || ||||| | ||||| || || Sbjct 360 CTCTTTATCTTGGATTTTAGATTTGACATTTTCGATTGTATCTGATGGCTCCACTTCCAA 301 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || || ||||| ||||| | ||| | ||||| Sbjct 300 GGTGATGGTTTTACCGGTCAATGTTTTCACGAAAATCTGCAT 259 >seq10805 Length=234 Score = 125 bits (138), Expect = 2e-23 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || ||||||||||| | || ||||||| |||||| | |||||||| | || || || Sbjct 215 GTTGATTCTTTTTGAATGTTATAATCGGACAAAGTACGGCCATCTTCCAATTGTTTACCG 156 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC-TT 225635 || ||||| | ||| || || || || ||||||||||| ||||||||||| ||| || || Sbjct 155 GCAAAGATCAATCGCTGCTGATCTGGTGGAATACCTTCTTTGTCTTGGAT-TTTAGCTTT 97 Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695 ||| ||| ||||| || || | ||| || || || || || || ||||| ||||| || Sbjct 96 TACATTTTCAATGGTATCCGATGGTTCAACTTCCAAAGTAATGGTTTTGCCAGTCAAGGT 37 Query 225696 TTTTATGAACACTTGCAT 225713 || | || | |||||| Sbjct 36 CTTGACAAAGATTTGCAT 19 >seq72749 Length=13731 Score = 123 bits (136), Expect = 6e-23 Identities = 121/156 (78%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 7571 TTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTT 7630 |||| || ||||| ||| |||| ||||| ||| | |||||||| |||| ||||| |||| Sbjct 10965 TTACAGCTCATGCTTTTATTATAATTTTTTTTATAGTTATGCCAATTATAATAGGGGGTT 10906 Query 7631 TCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTA 7690 | ||||||| ||| ||||||||||| ||||| || | ||||| || | || | | | Sbjct 10905 TTGGAAATTTATTAGTTCCTTTAATAATTGGGGCCACAGATATAGCATACCCTCGTTTAA 10846 Query 7691 ACAATATAAGTTTTTGATTACTACCGCCTTCCTTAT 7726 | ||||| |||||||| ||| |||| ||||| |||| Sbjct 10845 ATAATATGAGTTTTTGGTTATTACCCCCTTCTTTAT 10810 >seq4062 Length=326 Score = 116 bits (128), Expect = 9e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || ||||| ||||||| || ||||||| ||| |||| |||||||||| || || ||| Sbjct 313 GTCGATTCCTTTTGGATGTTATAATCGGACAATGTTCGACCATCTTCTAATTGTTTGCCA 254 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 || || || | ||| || || || || ||||| || || || || ||||| ||| |||| Sbjct 253 GCAAAAATCAATCGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTGGAT-TTTCGCTTT 195 Query 225637 -ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695 ||| ||||| || || || | || || || || ||||| || || || |||||||| Sbjct 194 TACATTCTCGATCGTATCAGATGGCTCAACTTCCAATGTGATGGTTTTACCAGTCAAAGT 135 Query 225696 TTTTATGAACACTTGCAT 225713 ||| | ||| | |||||| Sbjct 134 TTTGACGAAAATTTGCAT 117 >seq65859 Length=668 Score = 109 bits (120), Expect = 1e-18 Identities = 89/108 (82%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||| ||||| ||||| || || ||||| || ||||||||||| || |||||||| Sbjct 543 GAAAATTTGTCCATCTGTAATTGAAATGACATTGGTCGGGATATAAGCTGACACATCACC 602 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAA 4577 ||||| ||||||| || || || ||||| | ||||||||||||||| Sbjct 603 AGCTTGGGTTTCGATGACTGGCAAAGCTGTCAATGATCCACCACCAAA 650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1191419645767806