Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq42335 100 2e-16 seq10805 93.3 3e-14 >seq42335 Length=1439 Score = 100 bits (110), Expect = 2e-16 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 101010 TGCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGG 101069 ||||||| || | || || |||| ||||||||||||||| ||||| || |||||||| | Sbjct 259 TGCCGCCACGAAGTCGCAATACCAAGTGCAAAGTTGATTCCTTTTGTATGTTGTAATCAG 200 Query 101070 CCATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGG 101129 || ||| | |||||||||||| || || ||| | || | | ||| || ||| | Sbjct 199 ACAATGTTCGGCCATCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGAG 140 Query 101130 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT- 101188 | | ||||| ||||| ||||| ||| |||| | | || || | | ||| Sbjct 139 GGATACCTTCCTTGTCCTGGATTTTGGATTTAACATTTTCGATAGTGTCCGACG--GTTC 82 Query 101189 -GTTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | || |||||||| || ||||||||||| | ||| |||||||| Sbjct 81 GACTTCCAATGTTATAGTTTTACCAGTCAATGTTTTTACAAAGATTTGCAT 31 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 101009 TTGCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCG 101068 || || || || | || || |||| ||||| || ||||| ||||| |||||||||||| Sbjct 488 TTTCCACCACGAAGTCGCAATACCAAATGCAATGTCGATTCCTTTTGGATATTGTAATCG 429 Query 101069 GCCATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACG 101128 | || |||| |||||||||||| || || ||| | || | | ||| |||||| Sbjct 428 GACAAAGTTCGACCATCTTCCAATTGCTTTCCGGCAAAAATCAAACGTTGCTGGTCTGGC 369 Query 101129 GGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT 101188 || | || ||||| || ||||| ||| |||| | | || |||| | | Sbjct 368 GGAATTCCCTCTTTATCTTGGATTTTAGATTTGACATTTTCGATTGTATCTGATGGCTCC 309 Query 101189 GTTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | ||| || ||||| || ||||||||||| | ||||| ||||| Sbjct 308 ACTTCCAAGGTGATGGTTTTACCGGTCAATGTTTTCACGAAAATCTGCAT 259 >seq10805 Length=234 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 101027 AACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCT 101086 || |||| ||||| ||||||||||||||||| || ||||||| || ||| | |||| Sbjct 230 AATACCAAATGCAATGTTGATTCTTTTTGAATGTTATAATCGGACAAAGTACGGCCATCT 171 Query 101087 TCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCG 101146 ||||||||||| || ||| | || | | || || ||| || | ||||||||||| Sbjct 170 TCCAATTGTTTACCGGCAAAGATCAATCGCTGCTGATCTGGTGGAATACCTTCTTTGTCT 111 Query 101147 GCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--GTTTCGACGGTAATAG 101204 ||||| ||| |||| | | || || | | ||| ||| | ||||| | Sbjct 110 TGGATTTTAGCTTTTACATTTTCAATGGTATCCGATG--GTTCAACTTCCAAAGTAATGG 53 Query 101205 TTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||||||| ||||| || || | ||| |||||||| Sbjct 52 TTTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 19 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409297583084991