Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euroglyphus_20maynei_20[genbank_20GCA_5F002135145.1_202017-05-12] 72,749 sequences; 43,437,841 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq10805 129 5e-25 seq42335 118 9e-22 seq4062 100 2e-16 >seq10805 Length=234 Score = 129 bits (142), Expect = 5e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| |||||||| || ||||| |||||||||||||| ||||| ||||| Sbjct 19 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAAACCATTACTTTGGAAGTTGAACCATCG 78 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | |||||| ||||| ||||||||||| |||| ||||| Sbjct 79 GATACCATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAAGGTATTCCACCAGATCAG 138 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || | | || | ||| || ||||||||||||||| ||| || |||||||||| Sbjct 139 CAGCGATTGATCTTTGCCGGTAAACAATTGGAAGATGGCCGTACTTTGTCCGATTATAAC 198 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGT 111315 || ||||||||||| ||| | ||||| || |||||| Sbjct 199 ATTCAAAAAGAATCAACATTGCATTTGGTATTGCGT 234 >seq42335 Length=1439 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| ||||| || ||||| |||||||| |||||||| ||| ||||| ||| || Sbjct 259 ATGCAGATTTTCGTGAAAACATTGACCGGTAAAACCATCACCTTGGAAGTGGAGCCATCA 318 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | | | | || ||| ||||| || ||||| || |||| || || Sbjct 319 GATACAATCGAAAATGTCAAATCTAAAATCCAAGATAAAGAGGGAATTCCGCCAGACCAG 378 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||| | | |||| ||| || || |||||||||||| | |||| || ||||||| ||| Sbjct 379 CAACGTTTGATTTTTGCCGGAAAGCAATTGGAAGATGGTCGAACTTTGTCCGATTACAAT 438 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAA 111329 || ||||| ||||| ||| | ||||| || ||||| || || ||||| || Sbjct 439 ATCCAAAAGGAATCGACATTGCATTTGGTATTGCGACTTCGTGGTGGAAA 488 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| ||||| ||||| ||||| || ||||| || || ||||| ||||| Sbjct 31 ATGCAAATCTTTGTAAAAACATTGACTGGTAAAACTATAACATTGGAAGTCGAACCGTCG 90 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || || | | | || ||| ||||| ||||| ||||| | || ||||| Sbjct 91 GACACTATCGAAAATGTTAAATCCAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAG 150 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||| | | || | ||| || || |||||||||||| ||| || | ||||| || Sbjct 151 CAACGATTGATCTTTGCCGGAAAGCAATTGGAAGATGGCCGAACATTGTCTGATTACAAC 210 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 |||||||| ||||| || | || || || ||||| || || || |||| Sbjct 211 ATACAAAAGGAATCAACTTTGCACTTGGTATTGCGACTTCGTGGCGGCA 259 >seq4062 Length=326 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||||||||| |||||||| ||||| || |||||||| || ||||| || || Sbjct 117 ATGCAAATTTTCGTCAAAACTTTGACTGGTAAAACCATCACATTGGAAGTTGAGCCATCT 176 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | | | | |||||| ||||| || ||||| || |||| ||||| Sbjct 177 GATACGATCGAGAATGTAAAAGCGAAAATCCAGGATAAAGAGGGAATTCCACCAGATCAG 236 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || | | |||| ||| ||||||||||| |||||| | ||| || |||||||||| Sbjct 237 CAGCGATTGATTTTTGCTGGCAAACAATTAGAAGATGGTCGAACATTGTCCGATTATAAC 296 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTG 111309 || ||||| ||||| || | ||||| ||| Sbjct 297 ATCCAAAAGGAATCGACCTTGCATTTGGTG 326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421437210194824