Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17]
6,899 sequences; 494,890,867 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq891 125 7e-24
>seq891
Length=807508
Score = 125 bits (138), Expect = 7e-24
Identities = 187/264 (71%), Gaps = 6/264 (2%)
Strand=Plus/Minus
Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014
|||| || || ||||| || |||||||||||||| ||| ||| |||||||||
Sbjct 738466 AACAGCAAGCAGGCGAAGTCTGTGTGTAATCCCTCGTCCCTGGAGATGAGTTCGTTACTG 738407
Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074
||||| | || |||||| ||||| ||||| ||||| || || |||||||| |||
Sbjct 738406 AATGTAAGTCCAGGCATCAGACCTCGCTTCTTCAACCAGAAAATGGCGGCGAAACTACCA 738347
Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCT 17134
|| ||||| || || || || || ||||| ||||| | || ||||||| | || |||| |
Sbjct 738346 GAGAAGAAGATTCCTTCAACAGAGGCAAAAGCGATAATTCTTTCGGCGAATGTAGCGTTT 738287
Query 17135 TT---GTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTT 17191
|| ||| |||||| || | |||| || || |||| ||| | | | || |||
Sbjct 738286 TTCGCGTT---AATCCACTTGAGGGCCCAGTCTGCCTTTTTCTTCACGGCAGGGATGGTT 738230
Query 17192 TCTATGGCCTTAAATAATTTCTCT 17215
|| || || || || | ||| |||
Sbjct 738229 TCGATAGCGTTGAACAGTTTATCT 738206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517500968161320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |