Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17]
6,899 sequences; 494,890,867 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq891 100 3e-16
>seq891
Length=807508
Score = 100 bits (110), Expect = 3e-16
Identities = 184/270 (68%), Gaps = 0/270 (0%)
Strand=Plus/Minus
Query 16184 AGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGT 16243
||||| | |||| | || |||||||| |||| ||| ||||| ||| ||| |||
Sbjct 738475 AGGTGCCTGAACAGCAAGCAGGCGAAGTCTGTGTGTAATCCCTCGTCCCTGGAGATGAGT 738416
Query 16244 TCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA 16303
||||| || || | || ||||| ||||| ||||| |||||||| || || ||
Sbjct 738415 TCGTTACTGAATGTAAGTCCAGGCATCAGACCTCGCTTCTTCAACCAGAAAATGGCGGCG 738356
Query 16304 AATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTAC 16363
|| || || ||||| || || |||||||| ||||||||||| | || ||| ||| |
Sbjct 738355 AAACTACCAGAGAAGAAGATTCCTTCAACAGAGGCAAAAGCGATAATTCTTTCGGCGAAT 738296
Query 16364 GTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCC 16423
||||| | ||| |||||| || | |||| || || |||| || | |
Sbjct 738295 GTAGCGTTTTTCGCGTTAATCCACTTGAGGGCCCAGTCTGCCTTTTTCTTCACGGCAGGG 738236
Query 16424 ATCGTTTCTATGGCCTTAAACAATTTCTCT 16453
|| ||||| || || || |||| ||| |||
Sbjct 738235 ATGGTTTCGATAGCGTTGAACAGTTTATCT 738206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511370296900680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |