Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17] 6,899 sequences; 494,890,867 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq891 100 3e-16 >seq891 Length=807508 Score = 100 bits (110), Expect = 3e-16 Identities = 184/270 (68%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 16184 AGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGT 16243 ||||| | |||| | || |||||||| |||| ||| ||||| ||| ||| ||| Sbjct 738475 AGGTGCCTGAACAGCAAGCAGGCGAAGTCTGTGTGTAATCCCTCGTCCCTGGAGATGAGT 738416 Query 16244 TCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA 16303 ||||| || || | || ||||| ||||| ||||| |||||||| || || || Sbjct 738415 TCGTTACTGAATGTAAGTCCAGGCATCAGACCTCGCTTCTTCAACCAGAAAATGGCGGCG 738356 Query 16304 AATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTAC 16363 || || || ||||| || || |||||||| ||||||||||| | || ||| ||| | Sbjct 738355 AAACTACCAGAGAAGAAGATTCCTTCAACAGAGGCAAAAGCGATAATTCTTTCGGCGAAT 738296 Query 16364 GTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCC 16423 ||||| | ||| |||||| || | |||| || || |||| || | | Sbjct 738295 GTAGCGTTTTTCGCGTTAATCCACTTGAGGGCCCAGTCTGCCTTTTTCTTCACGGCAGGG 738236 Query 16424 ATCGTTTCTATGGCCTTAAACAATTTCTCT 16453 || ||||| || || || |||| ||| ||| Sbjct 738235 ATGGTTTCGATAGCGTTGAACAGTTTATCT 738206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511370296900680