Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17]
6,899 sequences; 494,890,867 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq6057 93.3 3e-14
>seq6057
Length=130802
Score = 93.3 bits (102), Expect = 3e-14
Identities = 90/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187
|| || ||||| | ||| |||||| || ||| | |||||||| || || || ||||
Sbjct 42360 GACAAGGAAGGAATTCCCCCAGATCAGCAGAGATTGATCTTTGCTGGAAAGCAGCTGGAG 42301
Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGT 25243
||| | |||| || |||||||||||||||| ||||||||||||||||| ||||
Sbjct 42300 GATGGAAGAACTCTGTCCGATTACAATATTCAGAAGGAATCTACTCTTCATCTGGT 42245
Score = 87.8 bits (96), Expect = 1e-12
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187
|| || ||||| | ||| |||||| || ||| | ||||| || || || ||| ||||
Sbjct 36588 GACAAGGAAGGAATTCCCCCAGATCAGCAGAGATTGATCTTCGCTGGAAAGCAACTGGAG 36529
Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGT 25243
||| | |||| || |||||||||||||||| |||||||| |||||||| ||||
Sbjct 36528 GATGGAAGAACTCTGTCCGATTACAATATTCAGAAGGAATCAACTCTTCATCTGGT 36473
Score = 87.8 bits (96), Expect = 1e-12
Identities = 86/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187
|| || ||||| | ||| |||||| || ||| | ||||| || || || || ||||
Sbjct 36816 GACAAGGAAGGAATTCCCCCAGATCAGCAGAGATTGATCTTCGCTGGAAAGCAGCTGGAG 36757
Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCAC 25238
||| | |||| || |||||||||||||||| ||||||||||||||||||
Sbjct 36756 GATGGAAGAACTCTGTCCGATTACAATATTCAGAAGGAATCTACTCTTCAC 36706
Score = 84.2 bits (92), Expect = 2e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187
|| |||||||| | ||| |||||| || ||| | ||||| || || || || ||||
Sbjct 37632 GACAAAGAAGGAATTCCCCCAGATCAGCAGAGATTGATCTTCGCTGGAAAGCAGCTGGAG 37573
Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGT 25243
||| | |||| || |||| ||||||||||| |||||||| |||||||| ||||
Sbjct 37572 GATGGAAGAACTCTGTCCGACTACAATATTCAGAAGGAATCAACTCTTCATCTGGT 37517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410762259563186
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |