Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17]
6,899 sequences; 494,890,867 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq6057 102 6e-17
>seq6057
Length=130802
Score = 102 bits (112), Expect = 6e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
||||||||||| ||||| ||| ||| | | || ||||| || ||||| |||||
Sbjct 36719 TCCTTCTGAATATTGTAATCGGACAGAGTTCTTCCATCCTCCAGCTGCTTTCCAGCGAAG 36778
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265
||||| | ||| || || || || | || ||||||||| || || |||||| |
Sbjct 36779 ATCAATCTCTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTC 36838
Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325
| | |||||| | | |||| ||||||| ||| || ||||| || |||| ||||| ||
Sbjct 36839 TCAATGCTGTCACTAGCCTCGACCTCCAGGGTGATGGTCTTTCCGGTCAAGGTCTTGACG 36898
Query 45326 AAGATTTGCAT 45336
||||| |||||
Sbjct 36899 AAGATCTGCAT 36909
Score = 96.9 bits (106), Expect = 3e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
||||||||||| ||||| ||| ||| | | || |||||||| ||||| |||||
Sbjct 36491 TCCTTCTGAATATTGTAATCGGACAGAGTTCTTCCATCCTCCAGTTGCTTTCCAGCGAAG 36550
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265
||||| | ||| || || || || | || ||||||||| ||| || |||||| |
Sbjct 36551 ATCAATCTCTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGAATCTTGGCCTTAACGTTC 36610
Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325
| | ||| || | | |||| ||||||| ||| || || || || || | ||||| ||
Sbjct 36611 TCGATGCTATCACTAGCCTCGACCTCCAGGGTGATGGTTTTACCGGTTAAGGTCTTGACG 36670
Query 45326 AAGATTTGCAT 45336
||||| |||||
Sbjct 36671 AAGATCTGCAT 36681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395041981459879
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |