Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17]
6,899 sequences; 494,890,867 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq891 98.7 2e-15
>seq891
Length=807508
Score = 98.7 bits (108), Expect = 2e-15
Identities = 176/254 (69%), Gaps = 5/254 (2%)
Strand=Plus/Plus
Query 101823 TGTTTAACGCTGCACAACACTTCCCCGCCATCAAGAAGAAGGAGCAGTGGGCTATTAATT 101882
|||| |||||| || | |||| ||| | ||||| |||| | ||||| | || |
Sbjct 738214 TGTTCAACGCTATCGAAACCATCCCTGCCGTGAAGAAAAAGGCAGACTGGGCCCTCAAGT 738273
Query 101883 GGATGCAAAGC-AATAACGAT---TTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAA 101938
|||| || || || |||| | || || ||| |||| | || ||||| | ||||||
Sbjct 738274 GGATT-AACGCGAAAAACGCTACATTCGCCGAAAGAATTATCGCTTTTGCCTCTGTTGAA 738332
Query 101939 GGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATCAAGAACAGGGGTATTTTG 101998
||||||||||| |||| ||||| ||||||||||| | ||||| | ||| | ||
Sbjct 738333 GGAATCTTCTTCTCTGGTAGTTTCGCCGCCATTTTCTGGTTGAAGAAGCGAGGTCTGATG 738392
Query 101999 CCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAAGGTCTTCATCGCGACTTT 102058
||||| || || | | || || |||| || |||||||| || | || |||||
Sbjct 738393 CCTGGACTTACATTCAGTAACGAACTCATCTCCAGGGACGAGGGATTACACACAGACTTC 738452
Query 102059 GCATGCATGCTGTT 102072
|| ||| |||||||
Sbjct 738453 GCCTGCTTGCTGTT 738466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989496527268545
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |