Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17] 6,899 sequences; 494,890,867 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq6057 96.9 3e-15 >seq6057 Length=130802 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| | |||||| || || || || || || ||||||||| ||| |||| | || || Sbjct 36472 AACCAGATGAAGAGTTGATTCCTTCTGAATATTGTAATCGGACAGAGTTCTTCCATCCTC 36531 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | ||| || |||||| | ||||| | || || || ||||||||||| ||||| Sbjct 36532 CAGTTGCTTTCCAGCGAAGATCAATCTCTGCTGATCTGGGGGAATTCCTTCCTTGTCCTG 36591 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||| ||| ||| || | || ||| |||| ||| || || || | ||| |||||||| Sbjct 36592 AATCTTGGCCTTAACGTTCTCGATGCTATCACTAGCCTCGACCTCCAGGGTGATGGTTTT 36651 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||| || | || || || || || |||||| Sbjct 36652 ACCGGTTAAGGTCTTGACGAAGATCTGCATA 36682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362148747406959