Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17] 6,899 sequences; 494,890,867 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq891 96.9 3e-15 >seq891 Length=807508 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 104886 GCAGGCAAAGTCTGTGTGCAATCCTTCATCTCTAGAAATAAGTTCGTTGCTGTAAGTCAA 104945 |||||| ||||||||||| ||||| || || || || || |||||||| ||| | || | Sbjct 738458 GCAGGCGAAGTCTGTGTGTAATCCCTCGTCCCTGGAGATGAGTTCGTTACTGAATGTAAG 738399 Query 104946 GCCAGGTAG-AGCCCCtttttttGTGTCTTTAATATAGTAGATGGCAGCAAAACTACCGG 105004 ||||| | || || | | |||| || || | ||||| || |||||||| | Sbjct 738398 TCCAGGCATCAGACC------TCGCTTCTTCAACC-AGAAAATGGCGGCGAAACTACCAG 738346 Query 105005 AGAAAAAGACACCTTCGACGATGGCAAACGCGACCATGCGTTCGGCGAATGTAGCAGTTT 105064 |||| |||| ||||| || |||||| |||| || | ||||||||||||||| ||| Sbjct 738345 AGAAGAAGATTCCTTCAACAGAGGCAAAAGCGATAATTCTTTCGGCGAATGTAGCGTTTT 738286 Query 105065 GACTTTCAATCCATTTCTGAGCCCATGTTGCCTT 105098 | |||||| || | ||||| |||||| Sbjct 738285 TCGCGTTAATCCACTTGAGGGCCCAGTCTGCCTT 738252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429899850309345