Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17]
6,899 sequences; 494,890,867 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq891 96.9 3e-15
>seq891
Length=807508
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/214 (71%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 104886 GCAGGCAAAGTCTGTGTGCAATCCTTCATCTCTAGAAATAAGTTCGTTGCTGTAAGTCAA 104945
|||||| ||||||||||| ||||| || || || || || |||||||| ||| | || |
Sbjct 738458 GCAGGCGAAGTCTGTGTGTAATCCCTCGTCCCTGGAGATGAGTTCGTTACTGAATGTAAG 738399
Query 104946 GCCAGGTAG-AGCCCCtttttttGTGTCTTTAATATAGTAGATGGCAGCAAAACTACCGG 105004
||||| | || || | | |||| || || | ||||| || |||||||| |
Sbjct 738398 TCCAGGCATCAGACC------TCGCTTCTTCAACC-AGAAAATGGCGGCGAAACTACCAG 738346
Query 105005 AGAAAAAGACACCTTCGACGATGGCAAACGCGACCATGCGTTCGGCGAATGTAGCAGTTT 105064
|||| |||| ||||| || |||||| |||| || | ||||||||||||||| |||
Sbjct 738345 AGAAGAAGATTCCTTCAACAGAGGCAAAAGCGATAATTCTTTCGGCGAATGTAGCGTTTT 738286
Query 105065 GACTTTCAATCCATTTCTGAGCCCATGTTGCCTT 105098
| |||||| || | ||||| ||||||
Sbjct 738285 TCGCGTTAATCCACTTGAGGGCCCAGTCTGCCTT 738252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429899850309345
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |