Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17]
6,899 sequences; 494,890,867 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq6057 82.4 6e-11
>seq6057
Length=130802
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || |||||||||||||| |||| || || || || | |
Sbjct 36681 ATGCAGATCTTCGTCAAGACCTTAACCGGTAAAACCATCACCCTGGAGGTCGAGGCTAGT 36622
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||| | | || | | || || ||||| |||||||| || ||||| || |||||
Sbjct 36621 GATAGCATCGAGAACGTTAAGGCCAAGATTCAGGACAAGGAAGGAATTCCCCCAGATCAG 36562
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || || || || || || | |||||| | || | |||||||||||
Sbjct 36561 CAGAGATTGATCTTCGCTGGAAAGCAACTGGAGGATGGAAGAACTCTGTCCGATTACAAT 36502
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428
||||| || ||||| || | ||| | |||
Sbjct 36501 ATTCAGAAGGAATCAACTCTTCATCTGGTT 36472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419692708613935
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |