Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17] 6,899 sequences; 494,890,867 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq891 102 1e-16 >seq891 Length=807508 Score = 102 bits (112), Expect = 1e-16 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 ||| || ||| ||| | |||||||| | |||||||||||| || ||| ||||| Sbjct 738455 GGCGAAGTCTGTGTGTAATCCCTCGTCCCTGGAGATGAGTTCGTTACTGAATGTAAGTCC 738396 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||| ||||| |||||||||||||||||||| || || ||| ||||||||||| Sbjct 738395 AGGCATCAGACCTCGCTTCTTCAACCAGAAAATGGCGGCGAAACTACCAGAGAAGAAGAT 738336 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGCGACTTTGTGTCAA 126224 ||| || ||| | || || || | | | || || || | |||| || | || || Sbjct 738335 TCCTTCAACAGAGGCAAAAGCGATAATTCTTTCGGCGAATGTAGCG-TTTTTCGCGTTAA 738277 Query 126225 ACCACTTCATCGCCCACTGCGCCTTTTTCT 126254 |||||| | ||||| | |||||||||| Sbjct 738276 TCCACTTGAGGGCCCAGTCTGCCTTTTTCT 738247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597302085718920