Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17] 6,899 sequences; 494,890,867 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq891 98.7 1e-15 >seq891 Length=807508 Score = 98.7 bits (108), Expect = 1e-15 Identities = 151/210 (72%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 || || ||| ||| | |||||||| | |||||||||||| || ||| || || Sbjct 738454 GCGAAGTCTGTGTGTAATCCCTCGTCCCTGGAGATGAGTTCGTTACTGAATGTAAGTCCA 738395 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCA-CAAAATGAGCCAGAGAAGAAGAT 127638 ||||| ||||| |||||||||||||||||||| || | ||| | |||||||||||||| Sbjct 738394 GGCATCAGACCTCGCTTCTTCAACCAGAAAATGGCGGCGAAACTA-CCAGAGAAGAAGAT 738336 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGC-AAAGGAGCGGGACTTTGTATCAA 127697 || || ||| | || || || | | | ||||| || | ||| | || | | || Sbjct 738335 TCCTTCAACAGAGGCAAAAGCGATAATTCTTTCGGCGAATGTAGC-GTTTTTCGCGTTAA 738277 Query 127698 ACCACTTCATCGCCCACTGTGCCTTTTTCT 127727 |||||| | ||||| | ||||||||||| Sbjct 738276 TCCACTTGAGGGCCCAGTCTGCCTTTTTCT 738247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613454292672840