Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17] 6,899 sequences; 494,890,867 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq4046 84.2 3e-11 >seq4046 Length=337920 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/147 (74%), Gaps = 3/147 (2%) Strand=Plus/Minus Query 204252 ACGC-CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGC 204310 |||| |||||||||||| | ||||||||| ||| || || ||||| |||||||||||| Sbjct 122657 ACGCTCTCGTTGTTGCCCAGAATCTGAGCAGTGGAAGCTGTTGGCATAGGAGCCAGGAGC 122598 Query 204311 AGGGAGTTGCGCACACCGTATTTTTGGACCCTGCG-CTTCAGAGAGGTCCAGTCGTGCAT 204369 || ||||| | ||||| | |||| | ||| | |||||| | ||| || || | Sbjct 122597 AGAGAGTTCCTTACACCAT-GCTTTGCAATCTGGGCCTTCAGCTTAGCCCAATCATGGAG 122539 Query 204370 CGCACTGGGTTTCACGCCCCACATGTC 204396 | || ||||| | || |||||||| || Sbjct 122538 CTCAGTGGGTGTTACTCCCCACATATC 122512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795086627803440