Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17]
6,899 sequences; 494,890,867 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq4046 84.2 3e-11
>seq4046
Length=337920
Score = 84.2 bits (92), Expect = 3e-11
Identities = 109/147 (74%), Gaps = 3/147 (2%)
Strand=Plus/Minus
Query 204252 ACGC-CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGC 204310
|||| |||||||||||| | ||||||||| ||| || || ||||| ||||||||||||
Sbjct 122657 ACGCTCTCGTTGTTGCCCAGAATCTGAGCAGTGGAAGCTGTTGGCATAGGAGCCAGGAGC 122598
Query 204311 AGGGAGTTGCGCACACCGTATTTTTGGACCCTGCG-CTTCAGAGAGGTCCAGTCGTGCAT 204369
|| ||||| | ||||| | |||| | ||| | |||||| | ||| || || |
Sbjct 122597 AGAGAGTTCCTTACACCAT-GCTTTGCAATCTGGGCCTTCAGCTTAGCCCAATCATGGAG 122539
Query 204370 CGCACTGGGTTTCACGCCCCACATGTC 204396
| || ||||| | || |||||||| ||
Sbjct 122538 CTCAGTGGGTGTTACTCCCCACATATC 122512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795086627803440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |