Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17]
6,899 sequences; 494,890,867 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq891 149 6e-31
seq6057 89.7 5e-13
>seq891
Length=807508
Score = 149 bits (164), Expect = 6e-31
Identities = 229/325 (70%), Gaps = 4/325 (1%)
Strand=Plus/Minus
Query 132816 CTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCAC 132875
||| |||| || ||||| |||| || ||| || ||| || ||| ||| || | |
Sbjct 738536 CTCAATGGAAACAGCGTCTTTGACAATCTCCAGAATACGCTCCTTGCTGGGC--TTCCTC 738479
Query 132876 --CAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATG 132933
|| ||| |||||| |||||| || ||||| || || |||||||||||||| |||
Sbjct 738478 TGCAGGTGCCTGAACAGCAAGCAGGCGAAGTCTGTGTGTAATCCCTCGTCCCTGGAGATG 738419
Query 132934 AGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCG 132993
|||||||| ||||| || | || ||||| || || || || || | ||| || ||||||
Sbjct 738418 AGTTCGTTACTGAATGTAAGTCCAGGCATCAGACCTCGCTTCTTCAACCAGAAAATGGCG 738359
Query 132994 GCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCG 133053
|||||||| || || ||||||| || || || | || ||||| | | | ||| ||
Sbjct 738358 GCGAAACTACCAGAGAAGAAGATTCCTTCAACAGAGGCAAAAGCGATAATTCTTTCGGCG 738299
Query 133054 AACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCAC 133113
|| || || | ||| | ||||| || ||||| || ||||||| || |||
Sbjct 738298 AATGTAGCGTTTTTCGCGTTAATCCACTTGAGGGCCCAGTCTGCCTTTTTCTTCACGGCA 738239
Query 133114 GGCATCGTTTCGATGGCGTTCAACA 133138
|| || |||||||| ||||| ||||
Sbjct 738238 GGGATGGTTTCGATAGCGTTGAACA 738214
>seq6057
Length=130802
Score = 89.7 bits (98), Expect = 5e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || || |||||||||||| | || |||||||| |
Sbjct 36681 ATGCAGATCTTCGTCAAGACCTTAACCGGTAAAACCATCACCCTGGAGGTCGAGGCTAGT 36622
Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| ||| | | |||| |||| | || || | ||||| || ||||||||| | || ||
Sbjct 36621 GATAGCATCGAGAACG-TTAAGGCCAAGATTCAGGACAAGGAAGGAATTCCCCCAGATCA 36563
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| | | || | ||| || || || ||||| || | | || || ||| |||||
Sbjct 36562 GCAGAGATTGATCTTCGCTGGAAAGCAACTGGAGGATGGAAGAACTCTGTCCGATTACAA 36503
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
|| || |||||| | || || ||| |||| ||
Sbjct 36502 TATTCAGAAGGAATCAACTCTTCATCTGGTTCT 36470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500129666348160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |