Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17]
6,899 sequences; 494,890,867 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq891 98.7 1e-15
seq4046 82.4 9e-11
>seq891
Length=807508
Score = 98.7 bits (108), Expect = 1e-15
Identities = 159/227 (70%), Gaps = 5/227 (2%)
Strand=Plus/Minus
Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573
|| || |||| |||||||| || |||||||| |||||||||||| || |||| |||
Sbjct 738436 CCCTCGTCCCTGGAGATGAGTTCGTTACTGAATGTAAGTCCAGGCATCAGACCTCGCTTC 738377
Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633
|| | ||| || ||||| ||||| ||||| |||||||| || || ||| |||| |||
Sbjct 738376 TTCAACCAGAAAATGGCGGCGAAACTACCAGAGAAGAAGATTCCTTCAACAGAGGCAAAA 738317
Query 119634 GCGAATAGACGCTCAGCAAAAGGTCGAGACTT----GTCGAACCACTTGAGAGCCCAGTT 119689
|||| | | || || || || | | || || | ||||||||| |||||||
Sbjct 738316 GCGATAATTCTTTCGGC-GAATGTAGCGTTTTTCGCGTTAATCCACTTGAGGGCCCAGTC 738258
Query 119690 GGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTT 119736
||||| || | | |||| |||| ||| || | ||| ||||
Sbjct 738257 TGCCTTTTTCTTCACGGCAGGGATGGTTTCGATAGCGTTGAACAGTT 738211
>seq4046
Length=337920
Score = 82.4 bits (90), Expect = 9e-11
Identities = 71/88 (81%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 109752 GTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGA 109811
|||||||||| | ||||||| || | | ||| |||||||| || || || ||||||||
Sbjct 122682 GTAGATGTTACTGGTGTAGGCCTCCACGCTCTCGTTGTTGCCCAGAATCTGAGCAGTGGA 122623
Query 109812 AGCTGTGGGCATGGGAGCCATGAGAAGA 109839
|||||| ||||| ||||||| ||| |||
Sbjct 122622 AGCTGTTGGCATAGGAGCCAGGAGCAGA 122595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588925208182200
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |