Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17]
6,899 sequences; 494,890,867 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq6057 91.5 1e-13
>seq6057
Length=130802
Score = 91.5 bits (100), Expect = 1e-13
Identities = 138/193 (72%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635
|| || |||||||||||||| || ||| ||| | || |||| |||||| || || ||
Sbjct 36719 TCCTTCTGAATATTGTAATCGGACAGAGTTCTTCCATCCTCCAGCTGCTTTCCAGCGAAG 36778
Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695
|||| || ||| ||||| | ||||| || |||||||| ||| || | ||| |
Sbjct 36779 ATCAATCTCTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGGATC-TTGGCCTTAACGTT 36837
Query 48696 CCCACAGACTCTGAC--GCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTA 48753
| || | || | || ||||| ||||||| || || || ||||| ||||| || || |
Sbjct 36838 CTCA-ATGCTGTCACTAGCCTCGACCTCCAGGGTGATGGTCTTTCCGGTCAAGGTCTTGA 36896
Query 48754 CAAAAATCTGCAT 48766
| || ||||||||
Sbjct 36897 CGAAGATCTGCAT 36909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380905570171377
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |