Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17]
6,899 sequences; 494,890,867 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq4046 120 2e-22
>seq4046
Length=337920
Score = 120 bits (132), Expect = 2e-22
Identities = 171/241 (71%), Gaps = 0/241 (0%)
Strand=Plus/Minus
Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951
||||| | || | |||||| ||| ||| || ||| ||| || | ||| ||||||
Sbjct 121865 GGACACATTAGACTCCAATCTCCATCAGCCTCTACCCTCTTCATGAAGAGATCAGGAATC 121806
Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011
||||| || || || | ||| || ||||| | || ||||| || |||||||| || | |
Sbjct 121805 CACATAGCGTAGAACAGATCCCTAGCTCTGTTCTCCTCTTTACCATGATTCTTCTTCAAA 121746
Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTT 26071
|| ||||| || ||||||||| ||||| ||||| | |||||||| || || |
Sbjct 121745 TCCAAGAACTCGAAAATATCTCCATGCCAGGGTTCAAGGTAGATAGCGAATGCTCCAGGT 121686
Query 26072 CTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGA 26131
|| || ||| || ||||| || ||||| || || | ||| || ||| ||| ||| |||
Sbjct 121685 CTCTTATTTCCTCCCTGATCAACATATCTGGCTGTGTTATTAAACACTCTCAGCATAGGA 121626
Query 26132 A 26132
|
Sbjct 121625 A 121625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253018724001425
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |