Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17]
6,899 sequences; 494,890,867 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq569 87.8 2e-12
>seq569
Length=874483
Score = 87.8 bits (96), Expect = 2e-12
Identities = 151/213 (71%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 139266 TCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTG 139325
|||| ||||| ||| | ||||| | | | || || ||||| | || ||||||||||||
Sbjct 340934 TCTGGTCCATGGTATACAGCATACATTGCTGATATGTTTGCCAAAAGAGCTTGTGCTGTG 340993
Query 139326 CAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAAT 139385
|| || || || || || ||||||| ||||||||| ||||| || || ||||| |||
Sbjct 340994 CAAATATTGGAAGTCGCCTTATCTCTTCGAATATGCTGTTCTCTTGTCTGCAGTGCCAAT 341053
Query 139386 CTGTATGCA-GGATTGCCTTC-GC-TGTCCACTGACTGACCTACAATTCTGCCAGGTATC 139442
||| | ||| ||| || || || | || | ||| || | ||||||||||| ||
Sbjct 341054 CTG-AAGCACTCATTTCCATCTGCATCTCTGGTCACT--CCAATCATTCTGCCAGGCATA 341110
Query 139443 TTTCTCTTATACTTGTCTGTTGTTGCAAAGAAT 139475
| || ||||| || | || |||||||||
Sbjct 341111 TGCCTAACATACTGGTTCTTGGTAGCAAAGAAT 341143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578948468625480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |