Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17] 6,899 sequences; 494,890,867 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq6679 113 4e-20 >seq6679 Length=1395180 Score = 113 bits (124), Expect = 4e-20 Identities = 191/277 (69%), Gaps = 0/277 (0%) Strand=Plus/Plus Query 34319 CAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCA 34378 |||| || ||||| || |||| ||||| |||||||| |||||||||||| |||| Sbjct 843719 CAGTTTCGGGGTTTTCGCATTGTTCACACAGAACAAACTTATTGATGAAACCATCCAGCA 843778 Query 34379 GGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAAT 34438 ||||| | ||| ||| || ||| | || || ||||| | | ||||| || || Sbjct 843779 TATCCTGCAGCTTTCCGGCCTCATGGCACCCATTCACGATATACCTCTCGTTCTTCACAT 843838 Query 34439 CGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGAC 34498 | || || || || |||||||| || || |||||||| || ||| | | |||| Sbjct 843839 CAGATTGGGTCTGAGCTCCCAGCTCACAACCAAAGTACTTGGTGACGTAGGTCGGAGGAC 843898 Query 34499 GTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCT 34558 | | ||||| || | || ||||||||| | ||||||||||| ||||| |||| Sbjct 843899 GAGCCAGCGCACGTGCAACATCAACCATGTTGACCAGCACAGTCTTGATACCGTTCCCCT 843958 Query 34559 TTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTA 34595 | || || ||||| || ||| | ||||| || || Sbjct 843959 TACCCTCAACCTTAGCCTGGATCCTAGGCATCTTATA 843995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412806887633207