Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17]
6,899 sequences; 494,890,867 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq5445 87.8 6e-14
seq86 82.4 2e-12
seq5379 78.8 3e-11
>seq5445
Length=1386597
Score = 87.8 bits (96), Expect = 6e-14
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||||| |||||||||||||||||| |||||||||||||||||||||||| ||||| |
Sbjct 309935 GGCTGTGATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCGAT 309876
Query 2828 CCCGGG 2833
||||||
Sbjct 309875 CCCGGG 309870
>seq86
Length=19873
Score = 82.4 bits (90), Expect = 2e-12
Identities = 53/58 (91%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833
||||||| |||||||||| |||||||||||||||||||||||| ||||| | ||||||
Sbjct 7035 TAGCTCAATTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCGATCCCGGG 6978
>seq5379
Length=194593
Score = 78.8 bits (86), Expect = 3e-11
Identities = 57/66 (86%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| | | |||||||||||||||||| |||||||||||||||||||||||| |||| |
Sbjct 119368 GGCCGTAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCAGTTCGAT 119427
Query 2828 CCCGGG 2833
|| |||
Sbjct 119428 CCTGGG 119433
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15848404023855
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |