Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17]
6,899 sequences; 494,890,867 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq6057 100 3e-16
>seq6057
Length=130802
Score = 100 bits (110), Expect = 3e-16
Identities = 139/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| ||||| |||||||||| || |||| | || ||||||||||| || || ||
Sbjct 36719 TCCTTCTGAATATTGTAATCGGACAGAGTTCTTCCATCCTCCAGCTGCTTTCCAGCGAAG 36778
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||| | |||||| || | |||| | ||||||||| |||| || || | | |||
Sbjct 36779 ATCAATCTCTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGGATC-TTGGCCTTAACGTT 36837
Query 35666 GCCACCG-TGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
|| | |||| || | || ||||||| ||||| || || || ||||| || || ||
Sbjct 36838 CTCAATGCTGTCACTAGCCTCGACCTCCAGGGTGATGGTCTTTCCGGTCAAGGTCTTGAC 36897
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 36898 GAAGATCTGCAT 36909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450754724686920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |