Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17] 6,899 sequences; 494,890,867 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq6057 100 3e-16 >seq6057 Length=130802 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| ||||| |||||||||| || |||| | || ||||||||||| || || || Sbjct 36719 TCCTTCTGAATATTGTAATCGGACAGAGTTCTTCCATCCTCCAGCTGCTTTCCAGCGAAG 36778 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| | |||||| || | |||| | ||||||||| |||| || || | | ||| Sbjct 36779 ATCAATCTCTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGGATC-TTGGCCTTAACGTT 36837 Query 35666 GCCACCG-TGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 || | |||| || | || ||||||| ||||| || || || ||||| || || || Sbjct 36838 CTCAATGCTGTCACTAGCCTCGACCTCCAGGGTGATGGTCTTTCCGGTCAAGGTCTTGAC 36897 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 36898 GAAGATCTGCAT 36909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450754724686920