Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17]
6,899 sequences; 494,890,867 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq891 100 2e-16
>seq891
Length=807508
Score = 100 bits (110), Expect = 2e-16
Identities = 135/185 (73%), Gaps = 5/185 (3%)
Strand=Plus/Plus
Query 44040 TGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAAT 44099
|||| || || || ||||| | ||||| | || | || |||||||||||||| || |
Sbjct 738214 TGTTCAACGCTATCGAAACCATCCCTGCCGTGAAGAAAAAGGCAGACTGGGCCCTCAAGT 738273
Query 44100 GGATAAATTC---AAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAG 44156
|||| || | ||| | | | || | ||| || || |||| ||||| ||| ||||
Sbjct 738274 GGATTAACGCGAAAAACGCTACATTCGCCGAAAGAATTATCGCTTTTGCCTCTGTTGAAG 738333
Query 44157 GCATTTTCTTTTCAGGATCGTTT-GCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATG 44215
| || ||||| || || | |||| || ||||| || ||||| ||||| |||||| |||||
Sbjct 738334 GAATCTTCTTCTCTGG-TAGTTTCGCCGCCATTTTCTGGTTGAAGAAGCGAGGTCTGATG 738392
Query 44216 CCTGG 44220
|||||
Sbjct 738393 CCTGG 738397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397422581278495
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |