Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17] 6,899 sequences; 494,890,867 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq891 93.3 1e-13 >seq891 Length=807508 Score = 93.3 bits (102), Expect = 1e-13 Identities = 130/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 443683 AACGAGAAAATCTCAGC-TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTG 443741 |||| ||||| | | | |||| ||| || | |||||||||| || |||||| | Sbjct 738279 AACGCGAAAAACGCTACATTCGCCGAAAGAATTATCGCTTTTGCCTCTGTTGAAGGAATC 738338 Query 443742 TTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGG 443801 || || || || ||| ||| |||| ||||||||||| ||||| || || |||| || Sbjct 738339 TTCTTCTCTGGTAG-TTTCGCCGCCATTTTCTGGTTGAAGAAGCGAGGTCTGATGCCTGG 738397 Query 443802 TCTGACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTG 443861 || || || ||||||||||| ||| |||||||||| || || ||||||||||| Sbjct 738398 ACTTACATTCAGTAACGAACTCATCTCCAGGGACGAGGGATTACACACAGACTTCGCCTG 738457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588195601521055