Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17] 6,899 sequences; 494,890,867 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq891 86.0 8e-12 >seq891 Length=807508 Score = 86.0 bits (94), Expect = 8e-12 Identities = 135/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736 ||||| || | ||| || ||||| || ||| || || ||||| ||||| |||||| Sbjct 738436 CCCTCGTCCCTGGAGATGAGTTCGTTACTGAATGTAAGTCCAGGCATCAGACCTCGCTTC 738377 Query 122737 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796 |||||||| |||| ||| ||| || ||||||||||| || || ||| | ||||| Sbjct 738376 TTCAACCAGAAAATGGCGGCGAAACTACCAGAGAAGAAGATTCCTTCAACAGAGGCAAAA 738317 Query 122797 GCAAAAAGGCGTTCGGCGAA-GGAGCGAGACTTTGCATCAAACCATTTCATTGCCCATTT 122855 || | || | ||||||||| | |||| || || | || ||| || | ||||| | Sbjct 738316 GCGATAATTCTTTCGGCGAATGTAGCG-TTTTTCGCGTTAATCCACTTGAGGGCCCAGTC 738258 Query 122856 CGCCTTCTTCT 122866 ||||| |||| Sbjct 738257 TGCCTTTTTCT 738247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627977840090400