Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17] 6,899 sequences; 494,890,867 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq891 89.7 6e-13 >seq891 Length=807508 Score = 89.7 bits (98), Expect = 6e-13 Identities = 95/123 (77%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 |||||||| | |||||||||||| || ||| || || ||||| ||||| |||||| Sbjct 738436 CCCTCGTCCCTGGAGATGAGTTCGTTACTGAATGTAAGTCCAGGCATCAGACCTCGCTTC 738377 Query 130094 TTCAACCAGAAAATCGCA-CAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAA 130152 |||||||||||||| || | ||| | |||||||||||||| || || ||| | || || Sbjct 738376 TTCAACCAGAAAATGGCGGCGAAACTA-CCAGAGAAGAAGATTCCTTCAACAGAGGCAAA 738318 Query 130153 CGC 130155 || Sbjct 738317 AGC 738315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618381867694440